RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.48
CLIP4-204ENST00000404424 CCDC47Q96A33 483 aaKnown RBP12.05□□□□□ -0.48
CLIP4-204ENST00000404424 PNKPQ96T60 521 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 CHP1Q99653 195 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 IL17RBQ9NRM6 502 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
CLIP4-204ENST00000404424 MAD2L2Q9UI95 211 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 MAPK8IP1Q9UQF2 711 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 ROBO1Q9Y6N7 1651 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 ROBO3Q96MS0 1386 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 TAF1P21675 1872 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 WDR93Q6P2C0 686 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
CLIP4-204ENST00000404424 AMOTL1Q8IY63 956 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 TRIM47Q96LD4 638 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 ZCCHC17Q9NP64 241 aaKnown RBP12.05□□□□□ -0.48
CLIP4-204ENST00000404424 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 BAZ2BQ9UIF8 2168 aaKnown RBP12.05□□□□□ -0.48
CLIP4-204ENST00000404424 CASZ1Q86V15 1759 aa12.05□□□□□ -0.48
CLIP4-204ENST00000404424 BICDL2A1A5D9 508 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 TRIM49BA6NDI0 452 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 ABL1P00519 1130 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 USP17L8P0C7I0 530 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 MEA1Q16626 185 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 TRAPPC11Q7Z392 1133 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 ABCB6Q9NP58 842 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 TFCP2L1Q9NZI6 479 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 ADAM21Q9UKJ8 722 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 SRGNP10124 158 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 MCM3P25205 808 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 CYLC1P35663 651 aaPredicted RBP12.04□□□□□ -0.48
CLIP4-204ENST00000404424 PMS1P54277 932 aaKnown RBP12.04□□□□□ -0.48
CLIP4-204ENST00000404424 HNRNPH2P55795 449 aaKnown RBP12.04□□□□□ -0.48
CLIP4-204ENST00000404424 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 TTI2Q6NXR4 508 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 FAM114A1Q8IWE2 563 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 CCDC170Q8IYT3 715 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 RASGRP4Q8TDF6 673 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 IQCDQ96DY2 449 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 RPGRIP1Q96KN7 1286 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 TMEM60Q9H2L4 133 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 GUCA1BQ9UMX6 200 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 REXO2Q9Y3B8 237 aaKnown RBP12.04□□□□□ -0.48
CLIP4-204ENST00000404424 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
CLIP4-204ENST00000404424 CNTNAP4Q9C0A0 1308 aa12.04□□□□□ -0.48
CLIP4-204ENST00000404424 STXBP3O00186 592 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 KRT86O43790 486 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 ST5P78524 1137 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 INF2Q27J81 1249 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 BICDL1Q6ZP65 573 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 BARGINQ6ZT62 677 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 LINC00116Q8NCU8 138 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 WDR66Q8TBY9 1149 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 ACBD3Q9H3P7 528 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 EXOC1Q9NV70 894 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 ZNHIT6Q9NWK9 470 aaKnown RBP12.03□□□□□ -0.48
CLIP4-204ENST00000404424 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
CLIP4-204ENST00000404424 H3BQF6 201 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 BAG3O95817 575 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 RHOXF2BP0C7M4 288 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 CCNE1P24864 410 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 VSNL1P62760 191 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 GSTO1P78417 241 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 MCM6Q14566 821 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 PAPD7Q5XG87 772 aaKnown RBP12.03□□□□□ -0.48
CLIP4-204ENST00000404424 WDR59Q6PJI9 974 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
CLIP4-204ENST00000404424 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 RHOXF2Q9BQY4 288 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 TUBGCP2Q9BSJ2 902 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 ZMYND12Q9H0C1 365 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 ZNF287Q9HBT7 754 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 PDE11AQ9HCR9 933 aa12.03□□□□□ -0.48
CLIP4-204ENST00000404424 NRAPQ86VF7 1730 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 PES1O00541 588 aaKnown RBP12.02□□□□□ -0.48
CLIP4-204ENST00000404424 LDHBP07195 334 aaKnown RBP12.02□□□□□ -0.48
CLIP4-204ENST00000404424 PPP4CP60510 307 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 AMPD3Q01432 767 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 ORC2Q13416 577 aaPredicted RBP12.02□□□□□ -0.48
CLIP4-204ENST00000404424 FIGNQ5HY92 759 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 KRT25Q7Z3Z0 450 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 HEATR3Q7Z4Q2 680 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 CERS3Q8IU89 383 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 C7orf25Q9BPX7 421 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 SPZ1Q9BXG8 430 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 TTYH3Q9C0H2 523 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 SAR1BQ9Y6B6 198 aa12.02□□□□□ -0.48
CLIP4-204ENST00000404424 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms