RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 DDX20Q9UHI6 824 aaKnown RBP20.98■□□□□ 0.95
THUMPD2-202ENST00000403537 SNX14Q9Y5W7 946 aa20.98■□□□□ 0.95
THUMPD2-202ENST00000403537 CYBAP13498 195 aa20.97■□□□□ 0.95
THUMPD2-202ENST00000403537 MCCP23508 829 aa20.97■□□□□ 0.95
THUMPD2-202ENST00000403537 RALYLQ86SE5 291 aaKnown RBP20.97■□□□□ 0.95
THUMPD2-202ENST00000403537 NCOA7Q8NI08 942 aa20.97■□□□□ 0.95
THUMPD2-202ENST00000403537 KCNB2Q92953 911 aa20.97■□□□□ 0.95
THUMPD2-202ENST00000403537 DDX11Q96FC9 970 aa20.97■□□□□ 0.95
THUMPD2-202ENST00000403537 PARP14Q460N5 1801 aa20.97■□□□□ 0.95
THUMPD2-202ENST00000403537 H0YGN5 161 aa20.96■□□□□ 0.95
THUMPD2-202ENST00000403537 TKFCQ3LXA3 575 aa20.96■□□□□ 0.95
THUMPD2-202ENST00000403537 RNF20Q5VTR2 975 aa20.96■□□□□ 0.95
THUMPD2-202ENST00000403537 CPXCR1Q8N123 301 aa20.96■□□□□ 0.95
THUMPD2-202ENST00000403537 GPHNQ9NQX3 736 aaPredicted RBP20.96■□□□□ 0.95
THUMPD2-202ENST00000403537 SEPT4O43236 478 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 CPA1P15085 419 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 TRDNQ13061 729 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 ZNF792Q3KQV3 632 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 ARRDC4Q8NCT1 418 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 ZSCAN10Q96SZ4 725 aaPredicted RBP20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 TINF2Q9BSI4 451 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 SENP2Q9HC62 589 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 RAVER2Q9HCJ3 691 aaKnown RBP20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 PNMA2Q9UL42 364 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 TNKSO95271 1327 aa20.95■□□□□ 0.94
THUMPD2-202ENST00000403537 CCDC96Q2M329 555 aa20.94■□□□□ 0.94
THUMPD2-202ENST00000403537 IQCA1Q86XH1 822 aa20.94■□□□□ 0.94
THUMPD2-202ENST00000403537 ENAHQ8N8S7 591 aaPredicted RBP20.94■□□□□ 0.94
THUMPD2-202ENST00000403537 DIS3LQ8TF46 1054 aaKnown RBP20.94■□□□□ 0.94
THUMPD2-202ENST00000403537 TCEANC2Q96MN5 208 aa20.94■□□□□ 0.94
THUMPD2-202ENST00000403537 TMEM47Q9BQJ4 181 aa20.94■□□□□ 0.94
THUMPD2-202ENST00000403537 MTMR7Q9Y216 660 aa20.94■□□□□ 0.94
THUMPD2-202ENST00000403537 PGK2P07205 417 aa20.93■□□□□ 0.94
THUMPD2-202ENST00000403537 MNX1P50219 401 aaPredicted RBP20.93■□□□□ 0.94
THUMPD2-202ENST00000403537 TSGA10IPQ3SY00 556 aa20.93■□□□□ 0.94
THUMPD2-202ENST00000403537 ZNF467Q7Z7K2 595 aaPredicted RBP20.93■□□□□ 0.94
THUMPD2-202ENST00000403537 ANKRD35Q8N283 1001 aa20.93■□□□□ 0.94
THUMPD2-202ENST00000403537 LRRC2Q9BYS8 371 aa20.93■□□□□ 0.94
THUMPD2-202ENST00000403537 CNPY2Q9Y2B0 182 aa20.93■□□□□ 0.94
THUMPD2-202ENST00000403537 DNM1LO00429 736 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 EPB41L2O43491 1005 aaKnown RBP20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 PRC1O43663 620 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 COL6A1P12109 1028 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 SLC4A3P48751 1232 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 SEC23AQ15436 765 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 KCTD1Q719H9 257 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 DGKHQ86XP1 1220 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 TRPV1Q8NER1 839 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 JAKMIP1Q96N16 626 aaKnown RBP20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 NEK1Q96PY6 1258 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 UBAC1Q9BSL1 405 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 ACAD9Q9H845 621 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 RIPK3Q9Y572 518 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 SYNGAP1Q96PV0 1343 aa20.92■□□□□ 0.94
THUMPD2-202ENST00000403537 DNAJC25-GNG10A0A024R161 153 aa20.91■□□□□ 0.94
THUMPD2-202ENST00000403537 CEP290O15078 2479 aa20.91■□□□□ 0.94
THUMPD2-202ENST00000403537 BTNL9Q6UXG8 535 aa20.91■□□□□ 0.94
THUMPD2-202ENST00000403537 PRR12Q9ULL5 1215 aa20.91■□□□□ 0.94
THUMPD2-202ENST00000403537 COL11A1P12107 1806 aaPredicted RBP20.9■□□□□ 0.94
THUMPD2-202ENST00000403537 IFIT3O14879 490 aaKnown RBP20.9■□□□□ 0.94
THUMPD2-202ENST00000403537 HABP4Q5JVS0 413 aaKnown RBP20.9■□□□□ 0.94
THUMPD2-202ENST00000403537 MAMDC4Q6UXC1 1216 aa20.9■□□□□ 0.94
THUMPD2-202ENST00000403537 PFASO15067 1338 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 KBTBD13C9JR72 458 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 RARBP10826 455 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 MCM5P33992 734 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 KRT32Q14532 448 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 TMEM67Q5HYA8 995 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 GPATCH4Q5T3I0 446 aaKnown RBP20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 IGDCC4Q8TDY8 1250 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 RNF146Q9NTX7 359 aa20.89■□□□□ 0.93
THUMPD2-202ENST00000403537 SH2B2O14492 632 aaPredicted RBP20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 ICAM1P05362 532 aa20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 AKR1A1P14550 325 aa20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 EXOSC10Q01780 885 aaKnown RBP20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 SYDE2Q5VT97 1194 aa20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 ANKS1AQ92625 1134 aa20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 LY9Q9HBG7 655 aa20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 HOMER2Q9NSB8 354 aa20.88■□□□□ 0.93
THUMPD2-202ENST00000403537 ZNF536O15090 1300 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 POTEB2H3BUK9 544 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 SNHG28P0DPA3 235 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 PDHBP11177 359 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 ALAS1P13196 640 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 CASTP20810 708 aaKnown RBP20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 ZNF543Q08ER8 600 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 PRAMEF19Q5SWL8 479 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 IFIT1BQ5T764 474 aaKnown RBP20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 PNMA1Q8ND90 353 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 AGBL1Q96MI9 1066 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 TRERF1Q96PN7 1200 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 UPF3BQ9BZI7 483 aaKnown RBP20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 RANBP17Q9H2T7 1088 aaKnown RBP20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 KAT14Q9H8E8 782 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 CCPG1Q9ULG6 757 aa20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 COLQQ9Y215 455 aaPredicted RBP20.87■□□□□ 0.93
THUMPD2-202ENST00000403537 FRMPD2Q68DX3 1309 aaPredicted RBP20.86■□□□□ 0.93
THUMPD2-202ENST00000403537 SLC34A2O95436 690 aa20.86■□□□□ 0.93
THUMPD2-202ENST00000403537 WTAPQ15007 396 aa20.86■□□□□ 0.93
THUMPD2-202ENST00000403537 CCDC174Q6PII3 467 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms