RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 TSC22D3Q99576 134 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 SFMBT1Q9UHJ3 866 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 CROCC2H7BZ55 1655 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 KRT19P08727 400 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 GRM1Q13255 1194 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 TSTA3Q13630 321 aaPredicted RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 BRDTQ58F21 947 aaPredicted RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 CCDC84Q86UT8 332 aaPredicted RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 NBPF5PQ86XG9 351 aaPredicted RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 MAPK8IP1Q9UQF2 711 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 HYOU1Q9Y4L1 999 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 EXOC3O60645 756 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 P4HA1P13674 534 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 CCT5P48643 541 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 HADHQ16836 314 aaKnown RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 C4orf50Q6ZRC1 276 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 MAP7D3Q8IWC1 876 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 TSC1Q92574 1164 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 MCM9Q9NXL9 1143 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 UBAP1LF5GYI3 381 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 POLD1P28340 1107 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 CAPN12Q6ZSI9 719 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 TRMT10CQ7L0Y3 403 aaKnown RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 MCUQ8NE86 351 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 CLTCL1P53675 1640 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 PDE6AP16499 860 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 ITKQ08881 620 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 LPXNO60711 386 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 DHX32Q7L7V1 743 aaKnown RBP15.14■□□□□ 0.01
RERE-204ENST00000400908 FBXL13Q8NEE6 735 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 NIP7Q9Y221 180 aaKnown RBP eCLIP15.14■□□□□ 0.01
RERE-204ENST00000400908 CHMLP26374 656 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 TUBB6Q9BUF5 446 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 PAG1Q9NWQ8 432 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 BLVRAP53004 296 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 DEUP1Q05D60 604 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 IQCB1Q15051 598 aa15.14■□□□□ 0.01
RERE-204ENST00000400908 ATF2P15336 505 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 ZKSCAN8Q15776 578 aaPredicted RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 TYW1BQ6NUM6 668 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 SLC52A2Q9HAB3 445 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 CAPN11Q9UMQ6 739 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 IQSEC3Q9UPP2 1182 aaPredicted RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 ARAP3Q8WWN8 1544 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 UNC13BO14795 1591 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 KCNK3O14649 394 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 PMS1P54277 932 aaKnown RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 NLRP12P59046 1061 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 ZC3H12BQ5HYM0 836 aaKnown RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 ATP7BP35670 1465 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 IFT88Q13099 833 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 CHST3Q7LGC8 479 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 WWC3Q9ULE0 1092 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 MTX1Q13505 466 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 ATP6V1E2Q96A05 226 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 DPH5Q9H2P9 285 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 SH2D4AQ9H788 454 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 INTS9Q9NV88 658 aaKnown RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 KSR1Q8IVT5 923 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 U2AF1L4Q8WU68 220 aaKnown RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
RERE-204ENST00000400908 CCDC51Q96ER9 411 aa15.13■□□□□ 0.01
RERE-204ENST00000400908 KIAA0232Q92628 1395 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 ATG16L1Q676U5 607 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 ZNF449Q6P9G9 518 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 RNF217Q8TC41 542 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 USP26Q9BXU7 913 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 SMYD2Q9NRG4 433 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 TRPM1Q7Z4N2 1603 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 TBCCQ15814 346 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 TRPC5Q9UL62 973 aaPredicted RBP15.12■□□□□ 0.01
RERE-204ENST00000400908 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 RRP15Q9Y3B9 282 aaKnown RBP15.12■□□□□ 0.01
RERE-204ENST00000400908 STAM2O75886 525 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 PDE1BQ01064 536 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 NR1H4Q96RI1 486 aaPredicted RBP15.12■□□□□ 0.01
RERE-204ENST00000400908 CSRNP1Q96S65 589 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 ANAPC5Q9UJX4 755 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 SLC13A4Q9UKG4 626 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 MAFGO15525 162 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 CCNT1O60563 726 aaKnown RBP15.12■□□□□ 0.01
RERE-204ENST00000400908 ANO1Q5XXA6 986 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 RRAGAQ7L523 313 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
RERE-204ENST00000400908 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
RERE-204ENST00000400908 NLRP1Q9C000 1473 aa15.11■□□□□ 0.01
RERE-204ENST00000400908 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms