RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CHGBP05060 677 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC142Q17RM4 750 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 CDR2LQ86X02 465 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 ZNF496Q96IT1 587 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 CALUO43852 315 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 RINT1Q6NUQ1 792 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 TRIM50Q86XT4 487 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 GSTO1P78417 241 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 ZNF568Q3ZCX4 644 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 BTN3A2P78410 334 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 FAM96AQ9H5X1 160 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 SUN2Q9UH99 717 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 RANBP6O60518 1105 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 DKC1O60832 514 aaKnown RBP eCLIP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC130P13994 396 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 CTNNA1P35221 906 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 PUDPQ08623 228 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 PSMA8Q8TAA3 256 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 PPP1R14BQ96C90 147 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 SAP30BPQ9UHR5 308 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 CUEDC2Q9H467 287 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 CLASP2O75122 1294 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 SNX4O95219 450 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 FOSL1P15407 271 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 IARSP41252 1262 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 BRD3Q15059 726 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 KRT14P02533 472 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 RARS2Q5T160 578 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 SLC30A9Q6PML9 568 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 IDH3BO43837 385 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 TMEM259Q4ZIN3 620 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 OMA1Q96E52 524 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 SLC4A2P04920 1241 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 IGBP1P78318 339 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 TTLL3Q9Y4R7 772 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 KLHL29Q96CT2 875 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 UVRAGQ9P2Y5 699 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 DIAPH2O60879 1101 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 NBPF14Q5TI25 921 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 NBPF15Q8N660 670 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 AKAP5P24588 427 aa9.34□□□□□ -0.91
CACNA1C-220ENST00000399655 SAC3D1A6NKF1 404 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 PGM3O95394 542 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 TSTA3Q13630 321 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 AARS2Q5JTZ9 985 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 DMAP1Q9NPF5 467 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 EMC3Q9P0I2 261 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 TNFAIP3P21580 790 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 OCRLQ01968 901 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 MINDY4BA8MYZ0 360 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 WDR75Q8IWA0 830 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 CCDC18Q5T9S5 1454 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 CCDC151A5D8V7 595 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 KRT81Q14533 505 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 VIPAS39Q9H9C1 493 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 MRGBPQ9NV56 204 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 IFIT3O14879 490 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 GUCA1CO95843 209 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 ITGAXP20702 1163 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 ICA1LQ8NDH6 482 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 MPP4Q96JB8 637 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 TBKBP1A7MCY6 615 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 ATF3P18847 181 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 TERB1Q8NA31 727 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 GPRASP1Q5JY77 1395 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 VGLL3A8MV65 326 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 STXBP3O00186 592 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 XPAP23025 273 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 HSD3B2P26439 372 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 STAT2P52630 851 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 BIN1O00499 593 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 CAPZA2P47755 286 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 SLC9C1Q4G0N8 1177 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 SLC5A1P13866 664 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 ARL13BQ3SXY8 428 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 FAM45BPQ6NSW5 357 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 B4GALNT2Q8NHY0 566 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 TRIM75PA6NK02 468 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 SRGAP2CP0DJJ0 459 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 GHRP10912 638 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 TFAP4Q01664 338 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 CNNM2Q9H8M5 875 aa9.33□□□□□ -0.92
CACNA1C-220ENST00000399655 HEATR1Q9H583 2144 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 NR1I2O75469 434 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 RALBP11234 206 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 ALS2CLQ60I27 953 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 CNNM4Q6P4Q7 775 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 MFN2O95140 757 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms