RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 BUB1O43683 1085 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 HEXIM1O94992 359 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 DMP1Q13316 513 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 MYRIPQ8NFW9 859 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SH3TC1Q8TE82 1336 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 TLR3O15455 904 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 RFX6Q8HWS3 928 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 BBS5Q8N3I7 341 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 ARPP21Q9UBL0 812 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 SERTAD1Q9UHV2 236 aa13.47□□□□□ -0.25
CACNA1C-219ENST00000399649 H7C0C1 242 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 GPC4O75487 556 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 PDE6AP16499 860 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 ATP5OP48047 213 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 RSBN1LQ6PCB5 846 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 DCLK2Q8N568 766 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 DPH5Q9H2P9 285 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 SYNJ2BP-COX16A0A087WUM0 186 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 NVLO15381 856 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 DLGAP5Q15398 846 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 XKR9Q5GH70 373 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 DRC3Q9H069 523 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 C19orf44Q9H6X5 657 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 COX16Q9P0S2 106 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 VPS54Q9P1Q0 977 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 EIF2AK4Q9P2K8 1649 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 HNRNPCL2B2RXH8 293 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 HNRNPCL1O60812 293 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 OTUD7BQ6GQQ9 843 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 CAPS2Q9BXY5 557 aa13.46□□□□□ -0.25
CACNA1C-219ENST00000399649 ADKP55263 362 aaKnown RBP13.46□□□□□ -0.26
CACNA1C-219ENST00000399649 HP1BP3Q5SSJ5 553 aaPredicted RBP13.46□□□□□ -0.26
CACNA1C-219ENST00000399649 PTPREP23469 700 aa13.46□□□□□ -0.26
CACNA1C-219ENST00000399649 VPS41P49754 854 aa13.46□□□□□ -0.26
CACNA1C-219ENST00000399649 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.46□□□□□ -0.26
CACNA1C-219ENST00000399649 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.26
CACNA1C-219ENST00000399649 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.26
CACNA1C-219ENST00000399649 TAF5LO75529 589 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 URB2Q14146 1524 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 HSP90AA5PQ58FG0 334 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 PASKQ96RG2 1323 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 VAMP4O75379 141 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 TMEM191BP0C7N4 346 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 POLR2MP0CAP2 368 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 ATP6V1E2Q96A05 226 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 ZNF532Q9HCE3 1301 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 INHBAP08476 426 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 SNCBQ16143 134 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 FAM160B1Q5W0V3 765 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 RYBPQ8N488 228 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 GDAP1L1Q96MZ0 367 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 MRPL11Q9Y3B7 192 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 GADL1Q6ZQY3 521 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 H7C1D1 291 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 TECP42680 631 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 TFAP4Q01664 338 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 RPS6KC1Q96S38 1066 aa13.45□□□□□ -0.26
CACNA1C-219ENST00000399649 RNF8O76064 485 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 ALDH1B1P30837 517 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 YWHAGP61981 247 aaKnown RBP eCLIP13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 FRMPD2Q68DX3 1309 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 SGK1O00141 431 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 STAMQ92783 540 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 DBNDD2Q9BQY9 259 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 USP40Q9NVE5 1235 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 TBC1D22AQ8WUA7 517 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 FAM227BQ96M60 508 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 OLA1Q9NTK5 396 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 ATP1A2P50993 1020 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 LMNB2Q03252 620 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 ARMCX5Q6P1M9 558 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 TAB3Q8N5C8 712 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 UBN1Q9NPG3 1134 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 ZNF148Q9UQR1 794 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 TMOD1P28289 359 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 IL9RQ01113 521 aa13.44□□□□□ -0.26
CACNA1C-219ENST00000399649 PPARAQ07869 468 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms