RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 GOLGA8CPA6NN73 597 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 GNA14O95837 355 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 NLRP12P59046 1061 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 HERC4Q5GLZ8 1057 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 ERO1AQ96HE7 468 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 SCYL1Q96KG9 808 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 SPON1Q9HCB6 807 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 NRBP2Q9NSY0 501 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 NDUFAB1O14561 156 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 KRT10P13645 584 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 KLHL30Q0D2K2 578 aa12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-215ENST00000399637 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 A0A1B0GUA9 196 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 LLPHQ9BRT6 129 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 VCX3AQ9NNX9 186 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 ARHGEF10O15013 1369 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 SLC27A2O14975 620 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 S100BP04271 92 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 MX2P20592 715 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 CHMLP26374 656 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 RNF10Q8N5U6 811 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 GRK7Q8WTQ7 553 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 PEX26Q7Z412 305 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 PLBD2Q8NHP8 589 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 XAGE2Q96GT9 111 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 A1BGP04217 495 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 IRX4P78413 519 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 MRPL11Q9Y3B7 192 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 TROVE2P10155 538 aaKnown RBP eCLIP12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 UBXN2AP68543 259 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 CFAP221Q4G0U5 840 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 MFSD14CQ5VZR4 134 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 POMGNT1Q8WZA1 660 aa12.11□□□□□ -0.47
CACNA1C-215ENST00000399637 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 PRDM1O75626 825 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 POLR2MP0CAP2 368 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 INPP5BP32019 993 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 FANCCQ00597 558 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 RBBP5Q15291 538 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 TNNI3KQ59H18 835 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 SEPT12Q8IYM1 358 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 HAUS1Q96CS2 278 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 CCDC68Q9H2F9 335 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 IPO11Q9UI26 975 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 FPGT-TNNI3KV9GXZ4 949 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 XPOTO43592 962 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 TFDP1Q14186 410 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 RMDN2Q96LZ7 410 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 SOS1Q07889 1333 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 CLNS1AP54105 237 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 LSM14BQ9BX40 385 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 ZNF521Q96K83 1311 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 HADHQ16836 314 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 CASP2P42575 452 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 MLKLQ8NB16 471 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 ZNF594Q96JF6 807 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 TAB2Q9NYJ8 693 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 DUOX2Q9NRD8 1548 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 ASXL2Q76L83 1435 aa12.1□□□□□ -0.47
CACNA1C-215ENST00000399637 LRMPQ12912 555 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 BRD3Q15059 726 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 ANKRD20A3Q5VUR7 823 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 NME8Q8N427 588 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 CSRNP1Q96S65 589 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 SRPK1Q96SB4 655 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 ZNF215Q9UL58 517 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 USP14P54578 494 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 NEMP1O14524 444 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 PRPSAP1Q14558 356 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 MGARPQ8TDB4 240 aa12.09□□□□□ -0.47
CACNA1C-215ENST00000399637 ZC4H2Q9NQZ6 224 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms