RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 KIAA1024Q9UPX6 916 aa15.25■□□□□ 0.03
CACNA1C-211ENST00000399617 RAET1EQ8TD07 263 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 ARHGEF1Q92888 912 aaKnown RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 BBOX1O75936 387 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 GH2P01242 217 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 PTPN21Q16825 1174 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 CCDC110Q8TBZ0 833 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 NXF1Q9UBU9 619 aaKnown RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 CEP104O60308 925 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 MECOMQ03112 1051 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 LRRC41Q15345 812 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 ZNF827Q17R98 1081 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 SH3RF3Q8TEJ3 882 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 POLD4Q9HCU8 107 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 CLIC2O15247 247 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 ZWINTO95229 277 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 ELF1P32519 619 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 GRAPQ13588 217 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 GRAPLQ8TC17 118 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 CEP170P1Q96L14 293 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 ESYT2A0FGR8 921 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 UPP2O95045 317 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 TTLL1O95922 423 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 HPDP32754 393 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 CRKP46108 304 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 ZNF157P51786 506 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 LACTBP83111 547 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 KLHL30Q0D2K2 578 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 PSMD2Q13200 908 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 METTL23Q86XA0 190 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 FMNL3Q8IVF7 1028 aa15.24■□□□□ 0.03
CACNA1C-211ENST00000399617 ROBO2Q9HCK4 1378 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 CCDC160A6NGH7 325 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 TNNC1P63316 161 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 BMP3P12645 472 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 TFAMQ00059 246 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 FAM83BQ5T0W9 1011 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 CCDC89Q8N998 374 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 ZNF202O95125 648 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 MYL5Q02045 173 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 SYDE2Q5VT97 1194 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 CPVLQ9H3G5 476 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 GIPC1O14908 333 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 IFNB1P01574 187 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 NLRP10Q86W26 655 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 FANCBQ8NB91 859 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 FAM149B1Q96BN6 582 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 ATP5JP18859 108 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 DAAM2Q86T65 1068 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 SNX25Q9H3E2 840 aa15.23■□□□□ 0.03
CACNA1C-211ENST00000399617 HNRNPDLO14979 420 aaKnown RBP15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 CYP2D6P10635 497 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 BCRP11274 1271 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 POSTNQ15063 836 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 DDX12PQ92771 950 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 BAG1Q99933 345 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 HESX1Q9UBX0 185 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 EIF2AK4Q9P2K8 1649 aaKnown RBP15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 NEK8Q86SG6 692 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 MTRF1LQ9UGC7 380 aaKnown RBP15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 CD58P19256 250 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 PCDHB4Q9Y5E5 795 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 GOLGA8IPA6NC78 632 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 GOLGA8JA6NMD2 632 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 SGSM2O43147 1006 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 TFDP1Q14186 410 aa15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 ALKBH8Q96BT7 664 aaKnown RBP15.22■□□□□ 0.03
CACNA1C-211ENST00000399617 SOS2Q07890 1332 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 GADD45BO75293 160 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 TBC1D8O95759 1140 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 ODR4Q5SWX8 454 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 ADCY9O60503 1353 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 BUB1O43683 1085 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 KMT5AQ9NQR1 393 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 HOXB7P09629 217 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 SCG2P13521 617 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 SMC6Q96SB8 1091 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 SYNDIG1Q9H7V2 258 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 ADD3Q9UEY8 706 aaKnown RBP15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 RABGAP1Q9Y3P9 1069 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 PARD3Q8TEW0 1356 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 CUTAO60888 179 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 KLHL40Q2TBA0 621 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 MXD3Q9BW11 206 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 PIDD1Q9HB75 910 aa15.21■□□□□ 0.03
CACNA1C-211ENST00000399617 CTTNQ14247 550 aaKnown RBP15.21■□□□□ 0.02
CACNA1C-211ENST00000399617 DEFB132Q7Z7B7 95 aa15.21■□□□□ 0.02
CACNA1C-211ENST00000399617 AMNQ9BXJ7 453 aa15.21■□□□□ 0.02
CACNA1C-211ENST00000399617 ME3Q16798 604 aa15.2■□□□□ 0.02
CACNA1C-211ENST00000399617 C8orf34Q49A92 452 aa15.2■□□□□ 0.02
CACNA1C-211ENST00000399617 TTBK2Q6IQ55 1244 aa15.2■□□□□ 0.02
CACNA1C-211ENST00000399617 DSTYKQ6XUX3 929 aa15.2■□□□□ 0.02
CACNA1C-211ENST00000399617 UBL4BQ8N7F7 174 aa15.2■□□□□ 0.02
CACNA1C-211ENST00000399617 RSAD2Q8WXG1 361 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms