RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 HOOK2Q96ED9 719 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 YIPF3Q9GZM5 350 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 STRIP2Q9ULQ0 834 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 GOLGA8KD6RF30 607 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 SUN1O94901 812 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 ART3Q13508 389 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 GRM8O00222 908 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 TOM1O60784 492 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 COG4Q9H9E3 785 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 PDE1BQ01064 536 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 TRIM14Q14142 442 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 PPP2R5EQ16537 467 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 SUGT1Q9Y2Z0 365 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 ARHGAP6O43182 974 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 PZPP20742 1482 aa13.66□□□□□ -0.22
CACNA1C-209ENST00000399603 SYNRGQ9UMZ2 1314 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 CAPN9O14815 690 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 CCNT1O60563 726 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 NCF2P19878 526 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 YWHAGP61981 247 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 MTX1Q13505 466 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 CCDC152Q4G0S7 254 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 OGFOD1Q8N543 542 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 ALKBH8Q96BT7 664 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 SYTL2Q9HCH5 934 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 C6orf203Q9P0P8 240 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 AMFRQ9UKV5 643 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 DISP1Q96F81 1524 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 NELFCDQ8IXH7 590 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 ST13P4Q8IZP2 240 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 RAB20Q9NX57 234 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 PAIP2BQ9ULR5 123 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 PACSIN2Q9UNF0 486 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 GARSP41250 739 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 FANCCQ00597 558 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 NMIQ13287 307 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 TMCO5AQ8N6Q1 288 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 NLRC4Q9NPP4 1024 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 GPHNQ9NQX3 736 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 PTPN22Q9Y2R2 807 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 CNNM4Q6P4Q7 775 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 RAB44Q7Z6P3 723 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 SH3GL2Q99962 352 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 LPXNO60711 386 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 DKC1O60832 514 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 SUPT3HO75486 399 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 TAGAPQ8N103 731 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 U2AF1L4Q8WU68 220 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 BTN2A2Q8WVV5 523 aa13.65□□□□□ -0.22
CACNA1C-209ENST00000399603 BUB1O43683 1085 aa13.65□□□□□ -0.23
CACNA1C-209ENST00000399603 GNA11P29992 359 aa13.65□□□□□ -0.23
CACNA1C-209ENST00000399603 DYMQ7RTS9 669 aa13.65□□□□□ -0.23
CACNA1C-209ENST00000399603 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.65□□□□□ -0.23
CACNA1C-209ENST00000399603 PFDN6O15212 129 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 MIGA1Q8NAN2 632 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 FLOT1O75955 427 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 TRPC1P48995 793 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 RNF207Q6ZRF8 634 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 CCDC197Q8NCU1 140 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 JAG2Q9Y219 1238 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 GOLGA5Q8TBA6 731 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 ZNF653Q96CK0 615 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 TTC1Q99614 292 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 ORC4O43929 436 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 DAB1O75553 588 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 VCAM1P19320 739 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 SFMBT2Q5VUG0 894 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 RRAGAQ7L523 313 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 ENAHQ8N8S7 591 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 TTLL11Q8NHH1 800 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 IP6K1Q92551 441 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 FAM207AQ9NSI2 230 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 PRR23D1E9PI22 279 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 PRR23D2P0DMB1 279 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 SLC9C2Q5TAH2 1124 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 NAA35Q5VZE5 725 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 PLEKHM3Q6ZWE6 761 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 ZC3H18Q86VM9 953 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
CACNA1C-209ENST00000399603 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms