RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 NHEJ1Q9H9Q4 299 aaPredicted RBP15.65■□□□□ 0.1
APOB-202ENST00000399256 CYLC1P35663 651 aaPredicted RBP15.65■□□□□ 0.1
APOB-202ENST00000399256 GIGYF2Q6Y7W6 1299 aaKnown RBP15.65■□□□□ 0.1
APOB-202ENST00000399256 AENQ8WTP8 325 aaKnown RBP15.65■□□□□ 0.1
APOB-202ENST00000399256 FAM184BQ9ULE4 1060 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 IPO7O95373 1038 aaKnown RBP15.64■□□□□ 0.09
APOB-202ENST00000399256 SLC5A1P13866 664 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 GNAT2P19087 354 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 TRIM21P19474 475 aaKnown RBP15.64■□□□□ 0.09
APOB-202ENST00000399256 FGFR2P21802 821 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 STAT6P42226 847 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 PPFIA1Q13136 1202 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 IFIT1BQ5T764 474 aaKnown RBP15.64■□□□□ 0.09
APOB-202ENST00000399256 ADSSL1Q8N142 457 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 PCMTD1Q96MG8 357 aaPredicted RBP15.64■□□□□ 0.09
APOB-202ENST00000399256 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 A0A1W2PQC6 194 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 SLC7A5Q01650 507 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 FKBP15Q5T1M5 1219 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 CATIPQ7Z7H3 387 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 PLIN2Q99541 437 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 LRRC1Q9BTT6 524 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 FAM107BQ9H098 131 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 MAGEC2Q9UBF1 373 aaPredicted RBP15.64■□□□□ 0.09
APOB-202ENST00000399256 SAMM50Q9Y512 469 aa15.64■□□□□ 0.09
APOB-202ENST00000399256 PDS5AQ29RF7 1337 aaKnown RBP15.64■□□□□ 0.09
APOB-202ENST00000399256 ZSCAN10Q96SZ4 725 aaPredicted RBP15.63■□□□□ 0.09
APOB-202ENST00000399256 ZNHIT6Q9NWK9 470 aaKnown RBP15.63■□□□□ 0.09
APOB-202ENST00000399256 LRP2BPQ9P2M1 347 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 DMGDHQ9UI17 866 aaKnown RBP15.63■□□□□ 0.09
APOB-202ENST00000399256 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 MYH13Q9UKX3 1938 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 BCAMP50895 628 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 MEA1Q16626 185 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 FBXW10Q5XX13 1052 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 CCDC70Q6NSX1 233 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 GPIHBP1Q8IV16 184 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 RASSF8Q8NHQ8 419 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 C8orf37Q96NL8 207 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 PSMB7Q99436 277 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 SMARCAL1Q9NZC9 954 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 IQSEC3Q9UPP2 1182 aaPredicted RBP15.63■□□□□ 0.09
APOB-202ENST00000399256 GRIN2DO15399 1336 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 SPATA31A5Q5VU36 1347 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 SPATA31A7Q8IWB4 1347 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 NLRP5P59047 1200 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 IQCEQ6IPM2 695 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 KRT26Q7Z3Y9 468 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 ADGRA1Q86SQ6 560 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 ANKRD18AQ8IVF6 992 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 SECISBP2LQ93073 1101 aaKnown RBP15.63■□□□□ 0.09
APOB-202ENST00000399256 MTA3Q9BTC8 594 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 LRWD1Q9UFC0 647 aa15.63■□□□□ 0.09
APOB-202ENST00000399256 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 EIF3HO15372 352 aaKnown RBP eCLIP15.62■□□□□ 0.091e-31■□□□□ 9.7
APOB-202ENST00000399256 EEF1GP26641 437 aaKnown RBP15.62■□□□□ 0.09
APOB-202ENST00000399256 SUGP1Q8IWZ8 645 aaKnown RBP15.62■□□□□ 0.09
APOB-202ENST00000399256 EXOC1Q9NV70 894 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 THRAP3Q9Y2W1 955 aaKnown RBP15.62■□□□□ 0.09
APOB-202ENST00000399256 TNS2Q63HR2 1409 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 ANO9A1A5B4 782 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 RASSF10A6NK89 507 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 VEGFAP15692 232 aaPredicted RBP15.62■□□□□ 0.09
APOB-202ENST00000399256 CYP7A1P22680 504 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 KIF5AQ12840 1032 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 CCDC96Q2M329 555 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 CREG2Q8IUH2 290 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 EHD2Q9NZN4 543 aa15.62■□□□□ 0.09
APOB-202ENST00000399256 PP2D1A8MPX8 630 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 PLEKP08567 350 aaPredicted RBP15.61■□□□□ 0.09
APOB-202ENST00000399256 MCTP2Q6DN12 878 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 TSEN2Q8NCE0 465 aaKnown RBP15.61■□□□□ 0.09
APOB-202ENST00000399256 TUBGCP2Q9BSJ2 902 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 MLXIPQ9HAP2 919 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 GEMIN8Q9NWZ8 242 aaKnown RBP15.61■□□□□ 0.09
APOB-202ENST00000399256 CAPN6Q9Y6Q1 641 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 MYH2Q9UKX2 1941 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 PAPPAQ13219 1627 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 LOC102724159A0A0B4J2E5 919 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 PDE8AO60658 829 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 CXCR5P32302 372 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 DNM2P50570 870 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 PPP2R5BQ15173 497 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 PWP2Q15269 919 aaKnown RBP15.61■□□□□ 0.09
APOB-202ENST00000399256 ZNF662Q6ZS27 426 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 AMOTL1Q8IY63 956 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 GPATCH11Q8N954 259 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 ARL8AQ96BM9 186 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 PYM1Q9BRP8 204 aaKnown RBP15.61■□□□□ 0.09
APOB-202ENST00000399256 TTYH3Q9C0H2 523 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 THAP9Q9H5L6 903 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 SNX12Q9UMY4 172 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 MROH5Q6ZUA9 1318 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 BAZ2BQ9UIF8 2168 aaKnown RBP15.61■□□□□ 0.09
APOB-202ENST00000399256 ZNF263O14978 683 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 SRGNP10124 158 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 TBC1D8BQ0IIM8 1120 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 TMTC3Q6ZXV5 915 aa15.61■□□□□ 0.09
APOB-202ENST00000399256 SRBD1Q8N5C6 995 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms