RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 OR52Z1P0C646 297 aa20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 APOBEC3HQ6NTF7 200 aaKnown RBP20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CDC42EP5Q6NZY7 148 aa20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 UPF1Q92900 1129 aaKnown RBP eCLIP20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CNKSR1Q969H4 720 aa20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 NAP1L4Q99733 375 aaKnown RBP20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 ZSCAN12O43309 604 aa20.01■□□□□ 0.79
HLA-DQB1-204ENST00000399084 GOLGA8HP0CJ92 632 aa20.01■□□□□ 0.79
HLA-DQB1-204ENST00000399084 E4F1Q66K89 784 aaPredicted RBP20.01■□□□□ 0.79
HLA-DQB1-204ENST00000399084 IDI2Q9BXS1 227 aa20.01■□□□□ 0.79
HLA-DQB1-204ENST00000399084 KBTBD4Q9NVX7 518 aa20.01■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PNMA6FA0A0J9YX94 578 aa20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 USP17L5A8MUK1 530 aa20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RPN1P04843 607 aaKnown RBP20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 AMPD3Q01432 767 aa20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 ZNF543Q08ER8 600 aa20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PICALMQ13492 652 aa20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MCTP2Q6DN12 878 aa20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MED15Q96RN5 788 aa20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 NAA15Q9BXJ9 866 aaKnown RBP20■□□□□ 0.79
HLA-DQB1-204ENST00000399084 H7C1D1 291 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CRKP46108 304 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 STIM1Q13586 685 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 SUPT20HQ8NEM7 779 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MKL1Q969V6 931 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PIGSQ96S52 555 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RAB34Q9BZG1 259 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 SAMSN1Q9NSI8 373 aaKnown RBP19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 INTS13Q9NVM9 706 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 AKR1B1P15121 316 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 SHMT1P34896 483 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 ADCY7P51828 1080 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PAK1Q13153 545 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 C2CD5Q86YS7 1000 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RASGRP4Q8TDF6 673 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CCDC51Q96ER9 411 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PANX2Q96RD6 677 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 DDX4Q9NQI0 724 aaKnown RBP19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PI4KBQ9UBF8 816 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 SERPINA10Q9UK55 444 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 ITIH6Q6UXX5 1313 aa19.99■□□□□ 0.79
HLA-DQB1-204ENST00000399084 ADAMTS3O15072 1205 aa19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CD44P16070 742 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PDIA5Q14554 519 aa19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 DOK7Q18PE1 504 aa19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 NOC3LQ8WTT2 800 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 TMEM60Q9H2L4 133 aa19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 ADD3Q9UEY8 706 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 LIMA1Q9UHB6 759 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MYH8P13535 1937 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 SLC26A4O43511 780 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CCNT1O60563 726 aaKnown RBP19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RHOBTB3O94955 611 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MRPL12P52815 198 aaKnown RBP19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 APTXQ7Z2E3 356 aaKnown RBP19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 HOMER1Q86YM7 354 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RASSF8Q8NHQ8 419 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 ZNF622Q969S3 477 aaKnown RBP eCLIP19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MTMR8Q96EF0 704 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PPP1R13BQ96KQ4 1090 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MTRQ99707 1265 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 BAG1Q99933 345 aaPredicted RBP19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 LRRC27Q9C0I9 530 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 KANSL2Q9H9L4 492 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RIC8AQ9NPQ8 531 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 NYAP2Q9P242 653 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 SYNPO2Q9UMS6 1093 aa19.97■□□□□ 0.79
HLA-DQB1-204ENST00000399084 F8W031 263 aaPredicted RBP19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 FXR2P51116 673 aaKnown RBP eCLIP19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 TRIM14Q14142 442 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 KARSQ15046 597 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 TRMT44Q8IYL2 757 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 MTMR7Q9Y216 660 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 USP27XA6NNY8 438 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 TPM1P09493 284 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 GCFC2P16383 781 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PBX1P40424 430 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 TMEM266Q2M3C6 531 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 LETM2Q2VYF4 491 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 COBLL1Q53SF7 1204 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 NAALADL2Q58DX5 795 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 DACT2Q5SW24 774 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PPP4R3AQ6IN85 833 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CABP7Q86V35 215 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 PPFIBP1Q86W92 1011 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 IGSF22Q8N9C0 903 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 TBCKQ8TEA7 893 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 DCAF4Q8WV16 495 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 CALML4Q96GE6 196 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 DHTKD1Q96HY7 919 aaPredicted RBP19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 VAT1LQ9HCJ6 419 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 STK17AQ9UEE5 414 aa19.96■□□□□ 0.79
HLA-DQB1-204ENST00000399084 GREB1LQ9C091 1923 aaPredicted RBP19.95■□□□□ 0.78
HLA-DQB1-204ENST00000399084 TMEM232C9JQI7 657 aa19.95■□□□□ 0.78
HLA-DQB1-204ENST00000399084 KLHL10Q6JEL2 608 aa19.95■□□□□ 0.78
HLA-DQB1-204ENST00000399084 C7orf25Q9BPX7 421 aa19.95■□□□□ 0.78
HLA-DQB1-204ENST00000399084 UBA5Q9GZZ9 404 aa19.95■□□□□ 0.78
HLA-DQB1-204ENST00000399084 TRMT1Q9NXH9 659 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms