RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CNTNAP5Q8WYK1 1306 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PPP1R11O60927 126 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 METAP2P50579 478 aaKnown RBP eCLIP14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 RTN1Q16799 776 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 NOL8Q76FK4 1167 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 MB21D1Q8N884 522 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ZNF296Q8WUU4 475 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SPZ1Q9BXG8 430 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 MOV10L1Q9BXT6 1211 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SPATC1LQ9H0A9 340 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PORCNQ9H237 461 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 RAVER2Q9HCJ3 691 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 RIPK3Q9Y572 518 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CASP8AP2Q9UKL3 1982 aa14.45□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ATP2A1O14983 1001 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 KIF5BP33176 963 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CCT2P78371 535 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SP3Q02447 781 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 NTRK3Q16288 839 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ME3Q16798 604 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 QRICH1Q2TAL8 776 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SYNE3Q6ZMZ3 975 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 GPRC5AQ8NFJ5 357 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 AGBL1Q96MI9 1066 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 EFCC1Q9HA90 598 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 NAP1L2Q9ULW6 460 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 MYH6P13533 1939 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 DOCK3Q8IZD9 2030 aa14.44□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PFKFB2O60825 505 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 DTNBO60941 627 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ZBED4O75132 1171 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 FDX1P10109 184 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 LBX1P52954 281 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 LACTBP83111 547 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SCRN1Q12765 414 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 STK3Q13188 491 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ANKRD1Q15327 319 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CDC37Q16543 378 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CCDC174Q6PII3 467 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CD99L2Q8TCZ2 262 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PIGSQ96S52 555 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 VAT1LQ9HCJ6 419 aa14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 RBM28Q9NW13 759 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-203ENST00000399082 hCG_1642624A0A1W2PR95 340 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 FKTNO75072 461 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ECM2O94769 699 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ICAM1P05362 532 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SMARCA1P28370 1054 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 STAT3P40763 770 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CTCFP49711 727 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 GNAQP50148 359 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 OAZ1P54368 228 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 RIOX2Q8IUF8 465 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CPXCR1Q8N123 301 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CCDC82Q8N4S0 544 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 NECAB1Q8N987 351 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 TEX13BQ9BXU2 312 aa14.42□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ZNF236Q9UL36 1845 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PPFIA3O75145 1194 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CTDNEP1O95476 244 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ERCC3P19447 782 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PLS1Q14651 629 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 SHCBP1Q8NEM2 672 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PIBF1Q8WXW3 757 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 GTF3C6Q969F1 213 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 LZTS2Q9BRK4 669 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 LCTP09848 1927 aa14.41□□□□□ -0.1
HLA-DQB1-203ENST00000399082 ZBTB5O15062 677 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 DHX16O60231 1041 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 IFNAR1P17181 557 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PSMC4P43686 418 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PPP2R5BQ15173 497 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 MUM1L1Q5H9M0 696 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CLEC4DQ8WXI8 215 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 PHKBQ93100 1093 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 CCPG1Q9ULG6 757 aa14.4□□□□□ -0.1
HLA-DQB1-203ENST00000399082 RBBP6Q7Z6E9 1792 aaKnown RBP14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PNMA6FA0A0J9YX94 578 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 OPLAHO14841 1288 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ST18O60284 1047 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SLC25A27O95847 323 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PKN1Q16512 942 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 GPR142Q7Z601 462 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SHISA4Q96DD7 197 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ERO1AQ96HE7 468 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SLKQ9H2G2 1235 aaPredicted RBP14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 RNF146Q9NTX7 359 aa14.39□□□□□ -0.11
HLA-DQB1-203ENST00000399082 HTTP42858 3142 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 CCDC196A0A1B0GTZ2 297 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 NFIBO00712 420 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ALAS1P13196 640 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 MAPK4P31152 587 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms