RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 CATSPERGQ6ZRH7 1159 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 TMTC3Q6ZXV5 915 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 ANKRD23Q86SG2 305 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 WASF1Q92558 559 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 MS4A4AQ96JQ5 239 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 PAGR1Q9BTK6 254 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 ASCC2Q9H1I8 757 aaPredicted RBP10.34□□□□□ -0.75
BRCC3-206ENST00000399042 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 FBXO28Q9NVF7 368 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
BRCC3-206ENST00000399042 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 V9GY48 417 aaPredicted RBP10.34□□□□□ -0.75
BRCC3-206ENST00000399042 MYH8P13535 1937 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 hCG_1642624A0A1W2PR95 340 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 FAM155AB1AL88 458 aaPredicted RBP10.33□□□□□ -0.76
BRCC3-206ENST00000399042 ALDH1A1P00352 501 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 XBP1P17861 261 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 SNAP25P60880 206 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 TRAF1Q13077 416 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 TRIM29Q14134 588 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 TAF1CQ15572 869 aaPredicted RBP10.33□□□□□ -0.76
BRCC3-206ENST00000399042 HEATR3Q7Z4Q2 680 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 ADGRF4Q8IZF3 695 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 CPXCR1Q8N123 301 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 SRBD1Q8N5C6 995 aaKnown RBP10.33□□□□□ -0.76
BRCC3-206ENST00000399042 PHKBQ93100 1093 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 P2RX7Q99572 595 aaKnown RBP10.33□□□□□ -0.76
BRCC3-206ENST00000399042 ZFYVE28Q9HCC9 887 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 ORC3Q9UBD5 711 aaPredicted RBP10.33□□□□□ -0.76
BRCC3-206ENST00000399042 PPP1R9AQ9ULJ8 1098 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 PRR12Q9ULL5 1215 aa10.33□□□□□ -0.76
BRCC3-206ENST00000399042 DOCK1Q14185 1865 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 TRPM7Q96QT4 1865 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 PTPDC1A2A3K4 754 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 FDX1P10109 184 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 CYP2C8P10632 490 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 HOXA7P31268 230 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-206ENST00000399042 MAP2K2P36507 400 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 FOSBP53539 338 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 IRX5P78411 483 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-206ENST00000399042 HMGN5P82970 282 aaKnown RBP10.32□□□□□ -0.76
BRCC3-206ENST00000399042 CDC37Q16543 378 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-206ENST00000399042 WDR78Q5VTH9 848 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 GPAT2Q6NUI2 795 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 FAM43AQ8N2R8 423 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 GTF3C2Q8WUA4 911 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-206ENST00000399042 ATG4CQ96DT6 458 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 PIGSQ96S52 555 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 LLPHQ9BRT6 129 aaKnown RBP10.32□□□□□ -0.76
BRCC3-206ENST00000399042 SLC45A1Q9Y2W3 748 aa10.32□□□□□ -0.76
BRCC3-206ENST00000399042 PNMA6FA0A0J9YX94 578 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 H3BQV1 296 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 ZBTB5O15062 677 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 PLA2G6O60733 806 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 FMNL1O95466 1100 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-206ENST00000399042 IFNAR1P17181 557 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 GCLCP48506 637 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-206ENST00000399042 HERVK_113P62684 666 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 CCNA1P78396 465 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 GNL2Q13823 731 aaKnown RBP10.31□□□□□ -0.76
BRCC3-206ENST00000399042 USH1GQ495M9 461 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 BTNL9Q6UXG8 535 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 FBXO11Q86XK2 927 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 MB21D1Q8N884 522 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 CCDC12Q8WUD4 166 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-206ENST00000399042 ZIC5Q96T25 663 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 PTPN18Q99952 460 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 SPZ1Q9BXG8 430 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 AMNQ9BXJ7 453 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 JMJD4Q9H9V9 463 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 RAVER2Q9HCJ3 691 aaKnown RBP10.31□□□□□ -0.76
BRCC3-206ENST00000399042 HOMER2Q9NSB8 354 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 PNMA2Q9UL42 364 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 CCPG1Q9ULG6 757 aa10.31□□□□□ -0.76
BRCC3-206ENST00000399042 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-206ENST00000399042 TESPA1A2RU30 521 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 IGF2BP3O00425 579 aaKnown RBP eCLIP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 VWA5AO00534 786 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 PRPF3O43395 683 aaKnown RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 JAK2O60674 1132 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 DTNBO60941 627 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 DEXIO95424 95 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 ALAS1P13196 640 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 GJB2P29033 226 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 STAT3P40763 770 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 TM4SF4P48230 202 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 NAPAP54920 295 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 MOGSQ13724 837 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 QRICH1Q2TAL8 776 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 SNRNP48Q6IEG0 339 aaKnown RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 NBPF11Q86T75 865 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 NCAPG2Q86XI2 1143 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms