RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 SNRNP48Q6IEG0 339 aaKnown RBP12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 PLEKHH3Q7Z736 793 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 ADGRF4Q8IZF3 695 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 NUP133Q8WUM0 1156 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 BRF1Q92994 677 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 COA7Q96BR5 231 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 KIF2CQ99661 725 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 C22orf23Q9BZE7 217 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 UBA5Q9GZZ9 404 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 CPVLQ9H3G5 476 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 RAVER2Q9HCJ3 691 aaKnown RBP12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 SRRDQ9UH36 339 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 GJD2Q9UKL4 321 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 PNMA2Q9UL42 364 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 RIPK3Q9Y572 518 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 CTDP1Q9Y5B0 961 aaPredicted RBP12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 ZBTB43O43298 467 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 CYTH3O43739 400 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 PTPREP23469 700 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 GNAQP50148 359 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 FGD1P98174 961 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 PRKCZQ05513 592 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 APOBRQ0VD83 1088 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 IRF5Q13568 498 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 GRB14Q14449 540 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 SLC35G1Q2M3R5 365 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 TKFCQ3LXA3 575 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 MORN1Q5T089 497 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 SYNE3Q6ZMZ3 975 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 NBPF11Q86T75 865 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 ABRAQ8N0Z2 381 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 CPXCR1Q8N123 301 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 SOCS4Q8WXH5 440 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 USP6NLQ92738 828 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 LZTS2Q9BRK4 669 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 JMJD4Q9H9V9 463 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 PDRG1Q9NUG6 133 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 GABRQQ9UN88 632 aa12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 BAZ2BQ9UIF8 2168 aaKnown RBP12.16□□□□□ -0.46
CYCSP55-201ENST00000399027 LRRC37A2A6NM11 1700 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 RXRAP19793 462 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 SNAP25P60880 206 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 CCDC174Q6PII3 467 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 CHST13Q8NET6 341 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 AGBL1Q96MI9 1066 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 UPF2Q9HAU5 1272 aaKnown RBP12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 FBXO40Q9UH90 709 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 HPS5Q9UPZ3 1129 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.46
CYCSP55-201ENST00000399027 HTTP42858 3142 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 ZBTB5O15062 677 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 PLEKHA8P1O95397 391 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 HOXC6P09630 235 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 FLT3LGP49771 235 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 QRICH1Q2TAL8 776 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 SRBD1Q8N5C6 995 aaKnown RBP12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 ZNF274Q96GC6 653 aaPredicted RBP12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 TBC1D32Q96NH3 1257 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 CCPG1Q9ULG6 757 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
CYCSP55-201ENST00000399027 GOLGA8AA7E2F4 631 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 GOLGA8BA8MQT2 603 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 FCER1AP12319 257 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 XRCC5P13010 732 aaKnown RBP12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 ADORA2AP29274 412 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 CDC27P30260 824 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 RGS2P41220 211 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 AK2P54819 239 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 FUT2Q10981 343 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 MAP2K5Q13163 448 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 ANKRD1Q15327 319 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 RTN1Q16799 776 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 WDR78Q5VTH9 848 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms