RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 MOXD2PA6NHM9 499 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 DCDC2CA8MYV0 355 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
SRMP1-201ENST00000398959 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
SRMP1-201ENST00000398959 SLC1A4P43007 532 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 KCNA10Q16322 511 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 CCDC144BQ3MJ40 725 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRMP1-201ENST00000398959 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 ABHD16BQ9H3Z7 469 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.2□□□□□ -0.3
SRMP1-201ENST00000398959 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
SRMP1-201ENST00000398959 MROH7Q68CQ1 1323 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 CDH23Q9H251 3354 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 ITGB8P26012 769 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 FPGSQ05932 587 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 CTDSPL2Q05D32 466 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
SRMP1-201ENST00000398959 KLHDC9Q8NEP7 349 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 VTI1AQ96AJ9 217 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 GMCL1Q96IK5 515 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
SRMP1-201ENST00000398959 GLT1D1Q96MS3 346 aa13.19□□□□□ -0.3
SRMP1-201ENST00000398959 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 ASGR1P07306 291 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 MCCP23508 829 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
SRMP1-201ENST00000398959 SMAD3P84022 425 aaKnown RBP13.18□□□□□ -0.3
SRMP1-201ENST00000398959 CNTN2Q02246 1040 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 KCTD1Q719H9 257 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 ANKRD33Q7Z3H0 272 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 CCDC144CPQ8IYA2 1237 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 FGD4Q96M96 766 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 TOX2Q96NM4 488 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 MTMR7Q9Y216 660 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 MYO9BQ13459 2157 aa13.18□□□□□ -0.3
SRMP1-201ENST00000398959 ADCY6O43306 1168 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
SRMP1-201ENST00000398959 NMT2O60551 498 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 ALAS1P13196 640 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 RRP1P56182 461 aaKnown RBP13.17□□□□□ -0.3
SRMP1-201ENST00000398959 GJA9P57773 515 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 CCSAPQ6IQ19 270 aaPredicted RBP13.17□□□□□ -0.3
SRMP1-201ENST00000398959 CCDC174Q6PII3 467 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 NOL8Q76FK4 1167 aaKnown RBP13.17□□□□□ -0.3
SRMP1-201ENST00000398959 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
SRMP1-201ENST00000398959 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
SRMP1-201ENST00000398959 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRMP1-201ENST00000398959 ZNF536O15090 1300 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 ELP1O95163 1332 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
SRMP1-201ENST00000398959 ASB14A6NK59 587 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 FOXP2O15409 715 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 PLA2G6O60733 806 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 EPHB4P54760 987 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
SRMP1-201ENST00000398959 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 RCSD1Q6JBY9 416 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 CDX2Q99626 313 aaPredicted RBP13.16□□□□□ -0.3
SRMP1-201ENST00000398959 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
SRMP1-201ENST00000398959 IL17RBQ9NRM6 502 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
SRMP1-201ENST00000398959 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
SRMP1-201ENST00000398959 TIMP1P01033 207 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 SNAP25P60880 206 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 RASGRP2Q7LDG7 609 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.15□□□□□ -0.3
SRMP1-201ENST00000398959 KATNBL1Q9H079 304 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 CCPG1Q9ULG6 757 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
SRMP1-201ENST00000398959 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.14□□□□□ -0.31
SRMP1-201ENST00000398959 SOWAHBA6NEL2 793 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 ARVCFO00192 962 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms