RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.27
CYLD-202ENST00000398568 IFT20Q8IY31 132 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 FBXL16Q8N461 479 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 OSBPL7Q9BZF2 842 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 HPS5Q9UPZ3 1129 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 OPLAHO14841 1288 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 GLE1Q53GS7 698 aaKnown RBP16.71■□□□□ 0.27
CYLD-202ENST00000398568 C3orf20Q8ND61 904 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 SPATA4Q8NEY3 305 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 P3H4Q92791 437 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 DBNDD2Q9BQY9 259 aa16.71■□□□□ 0.27
CYLD-202ENST00000398568 MAP3K15Q6ZN16 1313 aa16.71■□□□□ 0.26
CYLD-202ENST00000398568 PCDH11XQ9BZA7 1347 aa16.71■□□□□ 0.26
CYLD-202ENST00000398568 PCDH11YQ9BZA8 1340 aa16.71■□□□□ 0.26
CYLD-202ENST00000398568 RNF225M0QZC1 329 aaPredicted RBP16.7■□□□□ 0.26
CYLD-202ENST00000398568 CABP4P57796 275 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 TFCP2Q12800 502 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 KIF5AQ12840 1032 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 STAMBPL1Q96FJ0 436 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 CTNND2Q9UQB3 1225 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 MGRN1O60291 552 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 HERVK_113P62684 666 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
CYLD-202ENST00000398568 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
CYLD-202ENST00000398568 TTLL7Q6ZT98 887 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 HVCN1Q96D96 273 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 TACC1O75410 805 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 PRPHP41219 470 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 PAK2Q13177 524 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 BZW1Q7L1Q6 419 aaKnown RBP16.7■□□□□ 0.26
CYLD-202ENST00000398568 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
CYLD-202ENST00000398568 KCNQ3O43525 872 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
CYLD-202ENST00000398568 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
CYLD-202ENST00000398568 IFT81Q8WYA0 676 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 PLCD4Q9BRC7 762 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 YIPF3Q9GZM5 350 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 PDE6BP35913 854 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 PDCD2Q16342 344 aaPredicted RBP16.69■□□□□ 0.26
CYLD-202ENST00000398568 ODF2Q5BJF6 829 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 TRIM58Q8NG06 486 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 CCHCR1Q8TD31 782 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 SEC16BQ96JE7 1060 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
CYLD-202ENST00000398568 PTPREP23469 700 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 PPARAQ07869 468 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 CUL4BQ13620 913 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 EMC10Q5UCC4 262 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
CYLD-202ENST00000398568 SNX12Q9UMY4 172 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 C15orf41Q9Y2V0 281 aa16.69■□□□□ 0.26
CYLD-202ENST00000398568 NRAPQ86VF7 1730 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 ZNF233A6NK53 670 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 CAND2O75155 1236 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 RPS6KA3P51812 740 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 ITIH3Q06033 890 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 ZMYM1Q5SVZ6 1142 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 GKAP1Q5VSY0 366 aaPredicted RBP16.68■□□□□ 0.26
CYLD-202ENST00000398568 CPLX4Q7Z7G2 160 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 SMYD4Q8IYR2 804 aaPredicted RBP16.68■□□□□ 0.26
CYLD-202ENST00000398568 NUP133Q8WUM0 1156 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 KAZALD1Q96I82 304 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 PAIP2Q9BPZ3 127 aaKnown RBP16.68■□□□□ 0.26
CYLD-202ENST00000398568 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 DNAJC8O75937 253 aaPredicted RBP16.68■□□□□ 0.26
CYLD-202ENST00000398568 ELF3P78545 371 aaPredicted RBP16.68■□□□□ 0.26
CYLD-202ENST00000398568 ARMC9Q7Z3E5 817 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 PNMA8AQ86V59 439 aaPredicted RBP16.68■□□□□ 0.26
CYLD-202ENST00000398568 IQCKQ8N0W5 287 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 MYH8P13535 1937 aa16.68■□□□□ 0.26
CYLD-202ENST00000398568 USO1O60763 962 aaKnown RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 ANP32DO95626 131 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 IARSP41252 1262 aaKnown RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 ACTN4O43707 911 aaKnown RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 NEFHP12036 1026 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 LACTB2Q53H82 288 aaPredicted RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 CCDC63Q8NA47 563 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 NEUROD6Q96NK8 337 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 TSGA10Q9BZW7 698 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 TTC26A0AVF1 554 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 CLTAP09496 248 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 GRIN1Q05586 938 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 PSMD2Q13200 908 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 SPA17Q15506 151 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 CREG2Q8IUH2 290 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 PHKBQ93100 1093 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 EBF2Q9HAK2 575 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 NOP53Q9NZM5 478 aaKnown RBP16.67■□□□□ 0.26
CYLD-202ENST00000398568 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 NFU1Q9UMS0 254 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
CYLD-202ENST00000398568 COBLO75128 1261 aa16.66■□□□□ 0.26
CYLD-202ENST00000398568 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms