RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 GPAA1O43292 621 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 SRGAP2BP0DMP2 458 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 NNMTP40261 264 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 USP14P54578 494 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 FAM196AQ6ZSG2 479 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 LSM14BQ9BX40 385 aaKnown RBP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 UHRF1BP1LA0JNW5 1464 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 ARHGAP42A6NI28 874 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 HOXC9P31274 260 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 PDE6CP51160 858 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 KCNJ14Q9UNX9 436 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 HECW1Q76N89 1606 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 N4BP1O75113 896 aaKnown RBP12.34□□□□□ -0.43
RGPD2-201ENST00000398146 SRGAP2CP0DJJ0 459 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 COG7P83436 770 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 PPP2R5EQ16537 467 aa12.34□□□□□ -0.43
RGPD2-201ENST00000398146 ZNF532Q9HCE3 1301 aa12.33□□□□□ -0.43
RGPD2-201ENST00000398146 MYL1P05976 194 aa12.33□□□□□ -0.43
RGPD2-201ENST00000398146 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.43
RGPD2-201ENST00000398146 SIX6OS1Q8N1H7 587 aa12.33□□□□□ -0.43
RGPD2-201ENST00000398146 C8orf58Q8NAV2 365 aa12.33□□□□□ -0.43
RGPD2-201ENST00000398146 LPIN2Q92539 896 aa12.33□□□□□ -0.43
RGPD2-201ENST00000398146 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.43
RGPD2-201ENST00000398146 ACTN1P12814 892 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 CYP4A11Q02928 519 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 KLHL30Q0D2K2 578 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 KRT24Q2M2I5 525 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
RGPD2-201ENST00000398146 PPM1KQ8N3J5 372 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 TEKT4Q8WW24 435 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 LRRC4Q9HBW1 653 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 RIMS2Q9UQ26 1411 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
RGPD2-201ENST00000398146 SDCCAG3Q96C92 435 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 NEUROG2Q9H2A3 272 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 TRPC7Q9HCX4 862 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
RGPD2-201ENST00000398146 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 EIF4G3O43432 1585 aaKnown RBP12.33□□□□□ -0.44
RGPD2-201ENST00000398146 THAP12O43422 761 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 C21orf2O43822 256 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 SLFN13Q68D06 897 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 ZNF790Q6PG37 636 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 MX2P20592 715 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 NDUFAF2Q8N183 169 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 LZICQ8WZA0 190 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 NLRP4Q96MN2 994 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 VPS54Q9P1Q0 977 aa12.33□□□□□ -0.44
RGPD2-201ENST00000398146 CDK13Q14004 1512 aaKnown RBP12.33□□□□□ -0.44
RGPD2-201ENST00000398146 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 NCOA5Q9HCD5 579 aaKnown RBP12.32□□□□□ -0.44
RGPD2-201ENST00000398146 NXF1Q9UBU9 619 aaKnown RBP12.32□□□□□ -0.44
RGPD2-201ENST00000398146 EYA2O00167 538 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
RGPD2-201ENST00000398146 MTERF2Q49AM1 385 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 SCARA5Q6ZMJ2 495 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 PHLDB2Q86SQ0 1253 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 COPRSQ9NQ92 184 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 TPCN1Q9ULQ1 816 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 KIF28PB7ZC32 967 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 THOC5Q13769 683 aaKnown RBP12.32□□□□□ -0.44
RGPD2-201ENST00000398146 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 DNAAF3Q8N9W5 541 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 SNX19Q92543 992 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 PDE1AP54750 535 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 C8orf74Q6P047 294 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 THEM5Q8N1Q8 247 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 HELLSQ9NRZ9 838 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 DDX25Q9UHL0 483 aaKnown RBP12.32□□□□□ -0.44
RGPD2-201ENST00000398146 FPGT-TNNI3KV9GXZ4 949 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 FANCAO15360 1455 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 PHEXP78562 749 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 BFSP1Q12934 665 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 CACNA2D3Q8IZS8 1091 aa12.32□□□□□ -0.44
RGPD2-201ENST00000398146 AKR1B15C9JRZ8 316 aaPredicted RBP12.31□□□□□ -0.44
RGPD2-201ENST00000398146 HNRNPDLO14979 420 aaKnown RBP12.31□□□□□ -0.44
RGPD2-201ENST00000398146 CXorf38Q8TB03 319 aa12.31□□□□□ -0.44
RGPD2-201ENST00000398146 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
RGPD2-201ENST00000398146 IL16Q14005 1332 aa12.31□□□□□ -0.44
RGPD2-201ENST00000398146 MROH5Q6ZUA9 1318 aa12.31□□□□□ -0.44
RGPD2-201ENST00000398146 SYNRGQ9UMZ2 1314 aa12.31□□□□□ -0.44
RGPD2-201ENST00000398146 PMLP29590 882 aa12.31□□□□□ -0.44
RGPD2-201ENST00000398146 ADCY8P40145 1251 aa12.31□□□□□ -0.44
RGPD2-201ENST00000398146 GARSP41250 739 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms