RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MAP3K14Q99558 947 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 CENPFP49454 3210 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 RBM25P49756 843 aaKnown RBP29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 RIOX2Q8IUF8 465 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 CMTR1Q8N1G2 835 aaKnown RBP29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 FANCBQ8NB91 859 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 COA7Q96BR5 231 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 GOLGA8BA8MQT2 603 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 ATP2A1O14983 1001 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 KIF5BP33176 963 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 PRKCZQ05513 592 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 JMJD4Q9H9V9 463 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 HOMER2Q9NSB8 354 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 GABRQQ9UN88 632 aa29.53■■■□□ 2.32
TMEM55B-202ENST00000398020 PLEKHA8P1O95397 391 aa29.52■■■□□ 2.32
TMEM55B-202ENST00000398020 OAZ1P54368 228 aa29.52■■■□□ 2.32
TMEM55B-202ENST00000398020 PLEKHH3Q7Z736 793 aa29.52■■■□□ 2.32
TMEM55B-202ENST00000398020 KIF2CQ99661 725 aa29.52■■■□□ 2.32
TMEM55B-202ENST00000398020 BAZ2BQ9UIF8 2168 aaKnown RBP29.51■■■□□ 2.32
TMEM55B-202ENST00000398020 SLC25A27O95847 323 aa29.51■■■□□ 2.31
TMEM55B-202ENST00000398020 NEK4P51957 841 aa29.51■■■□□ 2.31
TMEM55B-202ENST00000398020 CDC37Q16543 378 aaPredicted RBP29.51■■■□□ 2.31
TMEM55B-202ENST00000398020 SHCBP1Q8NEM2 672 aa29.51■■■□□ 2.31
TMEM55B-202ENST00000398020 SRRDQ9UH36 339 aa29.51■■■□□ 2.31
TMEM55B-202ENST00000398020 GOLGA8AA7E2F4 631 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 CYTH3O43739 400 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 PIBF1Q8WXW3 757 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 MROH8Q9H579 483 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 CCPG1Q9ULG6 757 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 GNRH1P01148 92 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 ICAM1P05362 532 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 HOMER1Q86YM7 354 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 CCDC82Q8N4S0 544 aa29.5■■■□□ 2.31
TMEM55B-202ENST00000398020 SMCHD1A6NHR9 2005 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 ALAS1P13196 640 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 HOXD10P28358 340 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 FLT3LGP49771 235 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 RTN1Q16799 776 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 SRBD1Q8N5C6 995 aaKnown RBP29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 HPS5Q9UPZ3 1129 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 IVNS1ABPQ9Y6Y0 642 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 PLXNB2O15031 1838 aa29.49■■■□□ 2.31
TMEM55B-202ENST00000398020 METAP2P50579 478 aaKnown RBP eCLIP29.48■■■□□ 2.31
TMEM55B-202ENST00000398020 AK2P54819 239 aa29.48■■■□□ 2.31
TMEM55B-202ENST00000398020 QRICH1Q2TAL8 776 aa29.48■■■□□ 2.31
TMEM55B-202ENST00000398020 RIOX1Q9H6W3 641 aa29.48■■■□□ 2.31
TMEM55B-202ENST00000398020 GJD2Q9UKL4 321 aa29.48■■■□□ 2.31
TMEM55B-202ENST00000398020 PTPN22Q9Y2R2 807 aa29.48■■■□□ 2.31
TMEM55B-202ENST00000398020 PTPREP23469 700 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 CDC27P30260 824 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 USH1GQ495M9 461 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 NOL8Q76FK4 1167 aaKnown RBP29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 TBC1D32Q96NH3 1257 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 PIGSQ96S52 555 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 MCOLN1Q9GZU1 580 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 PTCH2Q9Y6C5 1203 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 PDIA3P30101 505 aaKnown RBP29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 GNAQP50148 359 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 EVCP57679 992 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 TMTC3Q6ZXV5 915 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 TRERF1Q96PN7 1200 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 RNF146Q9NTX7 359 aa29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 FAM217BQ9NTX9 383 aaPredicted RBP29.47■■■□□ 2.31
TMEM55B-202ENST00000398020 MYH6P13533 1939 aa29.46■■■□□ 2.31
TMEM55B-202ENST00000398020 COPB2P35606 906 aa29.46■■■□□ 2.31
TMEM55B-202ENST00000398020 NUDT12Q9BQG2 462 aa29.46■■■□□ 2.31
TMEM55B-202ENST00000398020 ADD1P35611 737 aaKnown RBP29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 CCT2P78371 535 aaKnown RBP29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 MUM1L1Q5H9M0 696 aa29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 MORN1Q5T089 497 aa29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 RAET1EQ8TD07 263 aa29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 MTMR8Q96EF0 704 aa29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 LZTS2Q9BRK4 669 aa29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 SPZ1Q9BXG8 430 aa29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 ALDH8A1Q9H2A2 487 aaPredicted RBP29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 RBM28Q9NW13 759 aaKnown RBP29.45■■■□□ 2.31
TMEM55B-202ENST00000398020 ZBTB5O15062 677 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 FCER1AP12319 257 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 CYP2B6P20813 491 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 ADORA2AP29274 412 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 RCAN1P53805 252 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 STK3Q13188 491 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 GRB14Q14449 540 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 MMP19Q99542 508 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 NCOA5Q9HCD5 579 aaKnown RBP29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 hCG_1642624A0A1W2PR95 340 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 SLC15A5A6NIM6 579 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 PPP1R11O60927 126 aaPredicted RBP29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 PKN2Q16513 984 aaKnown RBP29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 FBXO46Q6PJ61 603 aaPredicted RBP29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 CHST13Q8NET6 341 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 SOCS4Q8WXH5 440 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 TPCN1Q9ULQ1 816 aa29.44■■■□□ 2.3
TMEM55B-202ENST00000398020 STRNO43815 780 aa29.43■■■□□ 2.3
TMEM55B-202ENST00000398020 PRMT2P55345 433 aa29.43■■■□□ 2.3
TMEM55B-202ENST00000398020 KCTD2Q14681 263 aa29.43■■■□□ 2.3
TMEM55B-202ENST00000398020 FBXO11Q86XK2 927 aa29.43■■■□□ 2.3
TMEM55B-202ENST00000398020 ACAD9Q9H845 621 aa29.43■■■□□ 2.3
TMEM55B-202ENST00000398020 PGK2P07205 417 aa29.42■■■□□ 2.3
TMEM55B-202ENST00000398020 MAP2K5Q13163 448 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms