RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CHP1Q99653 195 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 GDAQ9Y2T3 454 aa17.9■□□□□ 0.46
CHMP1A-201ENST00000397901 ADAMTS3O15072 1205 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 INPP5BP32019 993 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 EVX2Q03828 476 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 CHRNDQ07001 517 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 TROAPQ12815 778 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 IL17AQ16552 155 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 WHAMMP3Q1A5X7 153 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 TCP11X2Q5H9J9 407 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 PDXDC2PQ6P474 469 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 RWDD2AQ9UIY3 292 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 ANAPC4Q9UJX5 808 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 WTIPA6NIX2 430 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 UBXN1Q04323 297 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 SKIDA1Q1XH10 827 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 DHX37Q8IY37 1157 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 PRPF38AQ8NAV1 312 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 GIMAP7Q8NHV1 300 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 GNL3LQ9NVN8 582 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 GUCA1BQ9UMX6 200 aa17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHMP1A-201ENST00000397901 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 NMT2O60551 498 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 GYG1P46976 350 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 DDR1Q08345 913 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 TMTC3Q6ZXV5 915 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 IQCA1Q86XH1 822 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 MYO6Q9UM54 1294 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 BCL9LQ86UU0 1499 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 GTPBP6O43824 516 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 NLRP5P59047 1200 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 CCDC152Q4G0S7 254 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 SRBD1Q8N5C6 995 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 TFR2Q9UP52 801 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 CNTNAP5Q8WYK1 1306 aa17.88■□□□□ 0.45
CHMP1A-201ENST00000397901 TRIM49BA6NDI0 452 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 LRRC10BA6NIK2 292 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 ENC1O14682 589 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 SPAG1Q07617 926 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 FAM212AQ96EL1 285 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 CABS1Q96KC9 395 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 REXO2Q9Y3B8 237 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 RPN1P04843 607 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 MAP9Q49MG5 647 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 HDAC6Q9UBN7 1215 aa17.87■□□□□ 0.45
CHMP1A-201ENST00000397901 MCM3P25205 808 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 PRCPP42785 496 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 AMPD2Q01433 879 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 ZNF658Q5TYW1 1059 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 HPCAL4Q9UM19 191 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 EPN1Q9Y6I3 576 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 BAZ2AQ9UIF9 1905 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 SHTN1A0MZ66 631 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 PPP1R12AO14974 1030 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 TOM1O60784 492 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 NDUFA10O95299 355 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 IRAK1P51617 712 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 TRIM14Q14142 442 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 FAM47AQ5JRC9 791 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 FAM76AQ8TAV0 307 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 JPH2Q9BR39 696 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 MYO1AQ9UBC5 1043 aa17.86■□□□□ 0.45
CHMP1A-201ENST00000397901 TTC26A0AVF1 554 aa17.85■□□□□ 0.45
CHMP1A-201ENST00000397901 NEDD9Q14511 834 aa17.85■□□□□ 0.45
CHMP1A-201ENST00000397901 LINC00116Q8NCU8 138 aa17.85■□□□□ 0.45
CHMP1A-201ENST00000397901 COL4A1P02462 1669 aa17.85■□□□□ 0.45
CHMP1A-201ENST00000397901 DUOX1Q9NRD9 1551 aa17.85■□□□□ 0.45
CHMP1A-201ENST00000397901 ATXN2Q99700 1313 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-201ENST00000397901 CALM1P0DP23 149 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 CALM2P0DP24 149 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 CALM3P0DP25 149 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 LRCH2Q5VUJ6 765 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 EGFL6Q8IUX8 553 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 KAT14Q9H8E8 782 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 USP17L12C9JPN9 530 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 USP17L21D6R901 530 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 DDAH1O94760 285 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 SCG2P13521 617 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 STAT6P42226 847 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 CLEC4GQ6UXB4 293 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 IRF2BP1Q8IU81 584 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 CCDC148Q8NFR7 591 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
CHMP1A-201ENST00000397901 STIM1Q13586 685 aa17.83■□□□□ 0.45
CHMP1A-201ENST00000397901 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.45
CHMP1A-201ENST00000397901 RMND1Q9NWS8 449 aa17.83■□□□□ 0.45
CHMP1A-201ENST00000397901 COL1A1P02452 1464 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-201ENST00000397901 SRGAP2O75044 1071 aa17.83■□□□□ 0.44
CHMP1A-201ENST00000397901 PMS1P54277 932 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-201ENST00000397901 PPFIA1Q13136 1202 aa17.83■□□□□ 0.44
CHMP1A-201ENST00000397901 RASGRP4Q8TDF6 673 aa17.83■□□□□ 0.44
CHMP1A-201ENST00000397901 PLIN2Q99541 437 aa17.83■□□□□ 0.44
CHMP1A-201ENST00000397901 ATP1A1P05023 1023 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 CALRP27797 417 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms