RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
SNRNP25-203ENST00000397876 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
SNRNP25-203ENST00000397876 RNF146Q9NTX7 359 aa16.91■□□□□ 0.3
SNRNP25-203ENST00000397876 ANAPC4Q9UJX5 808 aa16.91■□□□□ 0.3
SNRNP25-203ENST00000397876 STXBP5LQ9Y2K9 1186 aa16.91■□□□□ 0.3
SNRNP25-203ENST00000397876 TRIM43BA6NCK2 446 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 POTEB2H3BUK9 544 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 ORC4O43929 436 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 RANBP6O60518 1105 aaKnown RBP16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 PLA2G6O60733 806 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 TKFCQ3LXA3 575 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 ARMCX2Q7L311 632 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 TRIM43Q96BQ3 446 aaPredicted RBP16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 FGD4Q96M96 766 aa16.9■□□□□ 0.3
SNRNP25-203ENST00000397876 NMT2O60551 498 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 C6orf222P0C671 652 aaPredicted RBP16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 SHHQ15465 462 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 ALX1Q15699 326 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 CCDC144BQ3MJ40 725 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 FAM109BQ6ICB4 259 aaPredicted RBP16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 KCTD1Q719H9 257 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 TICAM2Q86XR7 235 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 CCDC144CPQ8IYA2 1237 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 KLHDC9Q8NEP7 349 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 AGBL1Q96MI9 1066 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 INCENPQ9NQS7 918 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 TOMM22Q9NS69 142 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 ZNF536O15090 1300 aa16.89■□□□□ 0.29
SNRNP25-203ENST00000397876 MCM3APO60318 1980 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 DCDC2CA8MYV0 355 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 ALAS1P13196 640 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 RAG1P15918 1043 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 AAMPQ13685 434 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 KCNA10Q16322 511 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 CCDC96Q2M329 555 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 C9orf50Q5SZB4 431 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 GLT1D1Q96MS3 346 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 TRERF1Q96PN7 1200 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 A1CFQ9NQ94 594 aaKnown RBP16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 TMEM39AQ9NV64 488 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 PRR12Q9ULL5 1215 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 MTMR7Q9Y216 660 aa16.88■□□□□ 0.29
SNRNP25-203ENST00000397876 MYADML2A6NDP7 307 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 ASB14A6NK59 587 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 ZNF697Q5TEC3 545 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 ANKRD33Q7Z3H0 272 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 TOX2Q96NM4 488 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 LNPKQ9C0E8 428 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 ZMYM6O95789 1325 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 MROH7Q68CQ1 1323 aa16.87■□□□□ 0.29
SNRNP25-203ENST00000397876 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 ADCY6O43306 1168 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 FGRP09769 529 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 NOVP48745 357 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 GJA9P57773 515 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 RASGRP2Q7LDG7 609 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 KATNBL1Q9H079 304 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 CCPG1Q9ULG6 757 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 ELP1O95163 1332 aa16.86■□□□□ 0.29
SNRNP25-203ENST00000397876 COL6A3P12111 3177 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 LRRC37A2A6NM11 1700 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 FGAP02671 866 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 ASGR1P07306 291 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 TOP1P11387 765 aaKnown RBP16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 ITGB8P26012 769 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 SNAP25P60880 206 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 FPGSQ05932 587 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 FAAP100Q0VG06 881 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 GNASQ5JWF2 1037 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 VTI1AQ96AJ9 217 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
SNRNP25-203ENST00000397876 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 SOWAHBA6NEL2 793 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 ICAM1P05362 532 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 SMAD3P84022 425 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 MUM1L1Q5H9M0 696 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 NSMFQ6X4W1 530 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms