RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SPAG1Q07617 926 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 FKBP15Q5T1M5 1219 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 NEK8Q86SG6 692 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 POTEDQ86YR6 584 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 NELFCDQ8IXH7 590 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 GDAP1L1Q96MZ0 367 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 NOC4LQ9BVI4 516 aaKnown RBP11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 POLLQ9UGP5 575 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 PLCG2P16885 1265 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 EPS15P42566 896 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 FAM193AP78312 1265 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 NR1I3Q14994 352 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 REXO1L1PQ8IX06 675 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 SLC35F6Q8N357 371 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 MTA3Q9BTC8 594 aa11.71□□□□□ -0.53
CPSF1P1-201ENST00000397477 CNTNAP4Q9C0A0 1308 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 TDP2O95551 362 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 HLA-DOAP06340 250 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 TNNT3P45378 269 aaPredicted RBP11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 CLCN6P51797 869 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 RCAN1P53805 252 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 GRM4Q14833 912 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 ZYXQ15942 572 aaKnown RBP11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 TDRD12Q587J7 1177 aaKnown RBP11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 QTRT2Q9H974 415 aaKnown RBP11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 LAMB4A4D0S4 1761 aa11.71□□□□□ -0.54
CPSF1P1-201ENST00000397477 CTAGE9A4FU28 777 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 SARSP49591 514 aaKnown RBP11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 ZNF658Q5TYW1 1059 aaPredicted RBP11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 KRT25Q7Z3Z0 450 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 CHP1Q99653 195 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 FLT1P17948 1338 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 PHACTR2O75167 634 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 TM4SF1P30408 202 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 ZNF76P36508 570 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 ADCY7P51828 1080 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 BMS1Q14692 1282 aaKnown RBP11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 KRT79Q5XKE5 535 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 SV2BQ7L1I2 683 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 CACNA2D4Q7Z3S7 1137 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 SPICE1Q8N0Z3 855 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 TBC1D16Q8TBP0 767 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 GJD4Q96KN9 370 aaPredicted RBP11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 JADE2Q9NQC1 790 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 BARHL2Q9NY43 387 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 TRIM10Q9UDY6 481 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 AFF2P51816 1311 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 GDF11O95390 407 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 TRAPPC10P48553 1259 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 CYP27A1Q02318 531 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 CCDC40Q4G0X9 1142 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 TCP11X2Q5H9J9 407 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 PLEKHA4Q9H4M7 779 aa11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 ADD3Q9UEY8 706 aaKnown RBP11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 MYO5AQ9Y4I1 1855 aaKnown RBP11.7□□□□□ -0.54
CPSF1P1-201ENST00000397477 SLIT2O94813 1529 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 PPEF1O14829 653 aaPredicted RBP11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 MFAP3LO75121 409 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 ZNF18P17022 549 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 KLK7P49862 253 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 PMS1P54277 932 aaKnown RBP11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 AMPD3Q01432 767 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 SYCP1Q15431 976 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 NPY5RQ15761 445 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 FCHSD1Q86WN1 690 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 FEZ1Q99689 392 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 CRACR2AQ9BSW2 395 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 PPP1R1BQ9UD71 204 aaPredicted RBP11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 STXBP3O00186 592 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 MTRQ99707 1265 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 TOGARAM1Q9Y4F4 1720 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 GLI3P10071 1580 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L15C9J2P7 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L13C9JLJ4 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L11C9JVI0 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L18D6R9N7 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L22D6RA61 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L17D6RBQ6 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L19D6RCP7 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L20D6RJB6 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 CLSTN1O94985 981 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 GYPCP04921 128 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 SLC1A4P43007 532 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 CHMP4BP1P59074 171 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L24Q0WX57 530 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 TUBGCP2Q9BSJ2 902 aa11.69□□□□□ -0.54
CPSF1P1-201ENST00000397477 ABCC6O95255 1503 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 MYO1BO43795 1136 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms