RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PYM1Q9BRP8 204 aaKnown RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 GLI3P10071 1580 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 LAMB4A4D0S4 1761 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 ZC3H4Q9UPT8 1303 aaKnown RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 MACROD2A1Z1Q3 448 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 LGALS16A8MUM7 142 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 NEBLO76041 1014 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 SATB1Q01826 763 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 ACTN3Q08043 901 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 C2orf54Q08AI8 447 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 PPP2R5BQ15173 497 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 IQCEQ6IPM2 695 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 PIK3AP1Q6ZUJ8 805 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 MTA3Q9BTC8 594 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 LRP2BPQ9P2M1 347 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 MYH7P12883 1935 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 PRPF3O43395 683 aaKnown RBP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 TRIM21P19474 475 aaKnown RBP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 IFIT1BQ5T764 474 aaKnown RBP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 GIGYF2Q6Y7W6 1299 aaKnown RBP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 SND1Q7KZF4 910 aaKnown RBP eCLIP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 SDR42E1Q8WUS8 393 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 TRIM47Q96LD4 638 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 DNAJC7Q99615 494 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 LACRTQ9GZZ8 138 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 NUP188Q5SRE5 1749 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 AGPSO00116 658 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 PDE2AO00408 941 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 SSBP05455 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 STAT6P42226 847 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 NLRP5P59047 1200 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 LRCH2Q5VUJ6 765 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 WDR59Q6PJI9 974 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 CAPN11Q9UMQ6 739 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 AKAP11Q9UKA4 1901 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 SKAP2O75563 359 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 IRAK1P51617 712 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 SETQ01105 290 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-206ENST00000397163 SEC23AQ15436 765 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 IRF2BP1Q8IU81 584 aa10.24□□□□□ -0.77
CAPN3-206ENST00000397163 MYH8P13535 1937 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 A0A1W2PQC6 194 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 RCCD1A6NED2 376 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 B4DLN1 442 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 SMIM22K7EJ46 135 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 CYP7A1P22680 504 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 GNGT1P63211 74 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 CYP27A1Q02318 531 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 PPFIA1Q13136 1202 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 ENAHQ8N8S7 591 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 EEF2KMTQ96G04 330 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 CAPS2Q9BXY5 557 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 AGPAT5Q9NUQ2 364 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 FAM184BQ9ULE4 1060 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 DUSP10Q9Y6W6 482 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 PKD1L3Q7Z443 1732 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 LRP6O75581 1613 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 PNPLA7Q6ZV29 1317 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 KIF1CO43896 1103 aaKnown RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 PMS1P54277 932 aaKnown RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 FUT2Q10981 343 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 KIF5AQ12840 1032 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 NAIF1Q69YI7 327 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 NHEJ1Q9H9Q4 299 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 RBM28Q9NW13 759 aaKnown RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 TMOD3Q9NYL9 352 aa10.23□□□□□ -0.77
CAPN3-206ENST00000397163 COL16A1Q07092 1604 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-206ENST00000397163 PDE8AO60658 829 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 SHOX2O60902 331 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-206ENST00000397163 STARD3NLO95772 234 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 FGFR2P21802 821 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 EEF1GP26641 437 aaKnown RBP10.22□□□□□ -0.77
CAPN3-206ENST00000397163 DNM2P50570 870 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 IL17AQ16552 155 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 EGFL6Q8IUX8 553 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 ADSSL1Q8N142 457 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 RNF217Q8TC41 542 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 RUFY1Q96T51 708 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 MROH5Q6ZUA9 1318 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 BCL9LQ86UU0 1499 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 KCPQ6ZWJ8 1503 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 ANO9A1A5B4 782 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 PSMA7O14818 248 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 BCAMP50895 628 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 BIRC2Q13490 618 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 SPA17Q15506 151 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 IQCA1Q86XH1 822 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 AMOTL1Q8IY63 956 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 ZNF507Q8TCN5 953 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 RDXP35241 583 aaKnown RBP10.22□□□□□ -0.77
CAPN3-206ENST00000397163 USP8P40818 1118 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 EZH2Q15910 746 aaKnown RBP10.22□□□□□ -0.77
CAPN3-206ENST00000397163 TMED8Q6PL24 325 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms