RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TRIM67Q6ZTA4 783 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 SULF1Q8IWU6 871 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 FANCCQ00597 558 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 TRIM14Q14142 442 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 ADPGKQ9BRR6 497 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 MAN1A2O60476 641 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 IL15P40933 162 aaPredicted RBP13.47□□□□□ -0.25
SMU1-201ENST00000397149 CCDC127Q96BQ5 260 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 PAWRQ96IZ0 340 aaKnown RBP13.47□□□□□ -0.25
SMU1-201ENST00000397149 ZFYVE1Q9HBF4 777 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 GRM8O00222 908 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 GNPATO15228 680 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 RAPGEF3O95398 923 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 CEP70Q8NHQ1 597 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 B4GALNT2Q8NHY0 566 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 KCNH3Q9ULD8 1083 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 FBLN1P23142 703 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 DYNLT1P63172 113 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 SPOPLQ6IQ16 392 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 CYTH2Q99418 400 aa13.47□□□□□ -0.25
SMU1-201ENST00000397149 PRDM5Q9NQX1 630 aaPredicted RBP13.47□□□□□ -0.25
SMU1-201ENST00000397149 BRAPQ7Z569 592 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 FAM149B1Q96BN6 582 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
SMU1-201ENST00000397149 CCPG1Q9ULG6 757 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 THOC5Q13769 683 aaKnown RBP13.46□□□□□ -0.25
SMU1-201ENST00000397149 KIF19Q2TAC6 998 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 TTC1Q99614 292 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 SYCE1LA8MT33 242 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 HADHAP40939 763 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 ADCY7P51828 1080 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
SMU1-201ENST00000397149 OTUD7BQ6GQQ9 843 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 NCAPG2Q86XI2 1143 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 POLR2BP30876 1174 aaKnown RBP13.46□□□□□ -0.25
SMU1-201ENST00000397149 OCRLQ01968 901 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 DDB1Q16531 1140 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 BBS5Q8N3I7 341 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 TEX9Q8N6V9 391 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 TTC25Q96NG3 672 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 CCDC90BQ9GZT6 254 aa13.46□□□□□ -0.25
SMU1-201ENST00000397149 ARHGEF9O43307 516 aa13.46□□□□□ -0.26
SMU1-201ENST00000397149 NUP58Q9BVL2 599 aa13.46□□□□□ -0.26
SMU1-201ENST00000397149 YIPF2Q9BWQ6 316 aa13.46□□□□□ -0.26
SMU1-201ENST00000397149 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.26
SMU1-201ENST00000397149 TMEM247A6NEH6 219 aa13.46□□□□□ -0.26
SMU1-201ENST00000397149 PIK3CAP42336 1068 aa13.46□□□□□ -0.26
SMU1-201ENST00000397149 CABP7Q86V35 215 aa13.46□□□□□ -0.26
SMU1-201ENST00000397149 NCOA5Q9HCD5 579 aaKnown RBP13.46□□□□□ -0.26
SMU1-201ENST00000397149 WARS2Q9UGM6 360 aaKnown RBP13.46□□□□□ -0.26
SMU1-201ENST00000397149 PLEKHH2Q8IVE3 1493 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 GEMIN8Q9NWZ8 242 aaKnown RBP13.45□□□□□ -0.26
SMU1-201ENST00000397149 E2F6O75461 281 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 CCDC159P0C7I6 412 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 ZBTB8OSQ8IWT0 167 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 PPM1KQ8N3J5 372 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 GRK7Q8WTQ7 553 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 GAS7O60861 476 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 TMEM191BP0C7N4 346 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 SKIP12755 728 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 ADKP55263 362 aaKnown RBP13.45□□□□□ -0.26
SMU1-201ENST00000397149 ANGPT1Q15389 498 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 KCTD16Q68DU8 428 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 NBNO60934 754 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 STAT1P42224 750 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 NRBF2Q96F24 287 aa13.45□□□□□ -0.26
SMU1-201ENST00000397149 LARSQ9P2J5 1176 aaKnown RBP13.45□□□□□ -0.26
SMU1-201ENST00000397149 TLR3O15455 904 aaKnown RBP13.44□□□□□ -0.26
SMU1-201ENST00000397149 PDE6CP51160 858 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 XKR9Q5GH70 373 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 K7ENM7 598 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 C16orf87Q6PH81 154 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 CACTINQ8WUQ7 758 aaKnown RBP13.44□□□□□ -0.26
SMU1-201ENST00000397149 CSRNP1Q96S65 589 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 E9PMD0 336 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 HNRNPCP07910 306 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■□□□ 11.4
SMU1-201ENST00000397149 ALAS1P13196 640 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 GRAMD4Q6IC98 578 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 CERS3Q8IU89 383 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 GSDMAQ96QA5 445 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 PMLP29590 882 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 SNCBQ16143 134 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 ATG16L1Q676U5 607 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 C7orf31Q8N865 590 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 PHKBQ93100 1093 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 ANKRD2Q9GZV1 360 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 SLC38A10Q9HBR0 1119 aa13.44□□□□□ -0.26
SMU1-201ENST00000397149 C1orf112Q9NSG2 853 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms