RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
NUP98-206ENST00000397013 TCRBV5S4A2TA0A5A2 114 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 APBB1O00213 710 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 STRNO43815 780 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 MAP3K12Q12852 859 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 SLC9C2Q5TAH2 1124 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 ZKSCAN2Q63HK3 967 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
NUP98-206ENST00000397013 ARMT1Q9H993 441 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 DCP1AQ9NPI6 582 aaPredicted RBP9.72□□□□□ -0.85
NUP98-206ENST00000397013 ZNF532Q9HCE3 1301 aa9.72□□□□□ -0.85
NUP98-206ENST00000397013 GRXCR1A8MXD5 290 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 GOLIM4O00461 696 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 SPTLC1O15269 473 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 PQBP1O60828 265 aaKnown RBP9.71□□□□□ -0.86
NUP98-206ENST00000397013 KDM4AO75164 1064 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 FLOT1O75955 427 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 ZNF865P0CJ78 1059 aaPredicted RBP9.71□□□□□ -0.86
NUP98-206ENST00000397013 FOSL2P15408 326 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 CLK2P49760 499 aaKnown RBP9.71□□□□□ -0.86
NUP98-206ENST00000397013 SMAD3P84022 425 aaKnown RBP9.71□□□□□ -0.86
NUP98-206ENST00000397013 CEP85Q6P2H3 762 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 C16orf59Q7L2K0 433 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 ITPRIPQ8IWB1 547 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 SHCBP1Q8NEM2 672 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 XPNPEP3Q9NQH7 507 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 PHF24Q9UPV7 400 aa9.71□□□□□ -0.86
NUP98-206ENST00000397013 A0A1W2PQ45 241 aaPredicted RBP9.7□□□□□ -0.86
NUP98-206ENST00000397013 A0A1W2PQY0 241 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 MYADML2A6NDP7 307 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 FAAP100Q0VG06 881 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 ZNF792Q3KQV3 632 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 RNPC3Q96LT9 517 aaKnown RBP9.7□□□□□ -0.86
NUP98-206ENST00000397013 MMP19Q99542 508 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 DNAJC2Q99543 621 aaKnown RBP9.7□□□□□ -0.86
NUP98-206ENST00000397013 MROH8Q9H579 483 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 TMX2Q9Y320 296 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 RIPK3Q9Y572 518 aa9.7□□□□□ -0.86
NUP98-206ENST00000397013 MYO5AQ9Y4I1 1855 aaKnown RBP9.7□□□□□ -0.86
NUP98-206ENST00000397013 RBAK-RBAKDNI3L0D1 243 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 KIAA0355O15063 1070 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 ADAMTS4O75173 837 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 CLTBP09497 229 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 FCER1AP12319 257 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 EEF2P13639 858 aaKnown RBP9.69□□□□□ -0.86
NUP98-206ENST00000397013 PTGS1P23219 599 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 CDK8P49336 464 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 C1orf53Q5VUE5 145 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 TMEM179Q6ZVK1 233 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 REPS2Q8NFH8 660 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 PANK1Q8TE04 598 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 NUP88Q99567 741 aaPredicted RBP9.69□□□□□ -0.86
NUP98-206ENST00000397013 TINF2Q9BSI4 451 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 CRNKL1Q9BZJ0 848 aaKnown RBP9.69□□□□□ -0.86
NUP98-206ENST00000397013 VCPKMTQ9H867 229 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 TMEM39AQ9NV64 488 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 POLR3EQ9NVU0 708 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 ADAMTS5Q9UNA0 930 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 TACC3Q9Y6A5 838 aa9.69□□□□□ -0.86
NUP98-206ENST00000397013 USP17L12C9JPN9 530 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 USP17L21D6R901 530 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 ADCY6O43306 1168 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 RAD21O60216 631 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 MBD4O95243 580 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 SNAI1O95863 264 aaPredicted RBP9.68□□□□□ -0.86
NUP98-206ENST00000397013 ACRP10323 421 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 RARBP10826 455 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 RAG1P15918 1043 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 STAT3P40763 770 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 ICA1Q05084 483 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 KCNA10Q16322 511 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 FAM83BQ5T0W9 1011 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 CCSAPQ6IQ19 270 aaPredicted RBP9.68□□□□□ -0.86
NUP98-206ENST00000397013 SIRT2Q8IXJ6 389 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 ABRAQ8N0Z2 381 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 RHPN1Q8TCX5 695 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■□□□□ 10.6
NUP98-206ENST00000397013 BOLA2Q9H3K6 86 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 DDX49Q9Y6V7 483 aaKnown RBP9.68□□□□□ -0.86
NUP98-206ENST00000397013 TTC28Q96AY4 2481 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 CDK5RAP2Q96SN8 1893 aa9.68□□□□□ -0.86
NUP98-206ENST00000397013 CHD9Q3L8U1 2897 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 VWA5AO00534 786 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 IGSF3O75054 1194 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 ACLYP53396 1101 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 FPGSQ05932 587 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 ADGRE1Q14246 886 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 CCDC85BQ15834 202 aaPredicted RBP9.67□□□□□ -0.86
NUP98-206ENST00000397013 C12orf60Q5U649 245 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 RNF180Q86T96 592 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 CERS3Q8IU89 383 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 RIOX2Q8IUF8 465 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 FTSJ3Q8IY81 847 aaKnown RBP9.67□□□□□ -0.86
NUP98-206ENST00000397013 MB21D1Q8N884 522 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 KLHDC9Q8NEP7 349 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 CHMP4CQ96CF2 233 aa9.67□□□□□ -0.86
NUP98-206ENST00000397013 PRR14Q9BWN1 585 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms