RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TCP11Q8WWU5 503 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 TNNQ9UQP3 1299 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
COL4A3-202ENST00000396578 ZBED4O75132 1171 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 PFKFB1P16118 471 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 ETF1P62495 437 aaKnown RBP15.26■□□□□ 0.03
COL4A3-202ENST00000396578 TTBK2Q6IQ55 1244 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 KBTBD3Q8NAB2 608 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 KLHDC4Q8TBB5 520 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 SLFN12Q8IYM2 578 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 MYL10Q9BUA6 226 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 SMYD2Q9NRG4 433 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 ZNF148Q9UQR1 794 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 SGK1O00141 431 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 OTUD7BQ6GQQ9 843 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 TUBB6Q9BUF5 446 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 IVNS1ABPQ9Y6Y0 642 aa15.26■□□□□ 0.03
COL4A3-202ENST00000396578 GPC4O75487 556 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 STX1BP61266 288 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 ARMC9Q7Z3E5 817 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 DEPTORQ8TB45 409 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 EEF1DP29692 281 aaKnown RBP15.25■□□□□ 0.03
COL4A3-202ENST00000396578 CDC25BP30305 580 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 FAM102BQ5T8I3 360 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 UIMC1Q96RL1 719 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 TNNC2P02585 160 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 EEF1B2P24534 225 aaKnown RBP15.25■□□□□ 0.03
COL4A3-202ENST00000396578 PTPROQ16827 1216 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 DCLK2Q8N568 766 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 METTL22Q9BUU2 404 aaPredicted RBP15.25■□□□□ 0.03
COL4A3-202ENST00000396578 EPN1Q9Y6I3 576 aaPredicted RBP15.25■□□□□ 0.03
COL4A3-202ENST00000396578 UFL1O94874 794 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
COL4A3-202ENST00000396578 ANGPTL2Q9UKU9 493 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 ATP8B1O43520 1251 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 NME8Q8N427 588 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 PPP1R13BQ96KQ4 1090 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 CFBP00751 764 aa15.25■□□□□ 0.03
COL4A3-202ENST00000396578 POLR2BP30876 1174 aaKnown RBP15.25■□□□□ 0.03
COL4A3-202ENST00000396578 FAM170AA1A519 330 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 E7EWF7 191 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 SKIP12755 728 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 DMP1Q13316 513 aaPredicted RBP15.24■□□□□ 0.03
COL4A3-202ENST00000396578 ARHGEF18Q6ZSZ5 1173 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 NLRX1Q86UT6 975 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 LIG4P49917 911 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 PIP4K2CQ8TBX8 421 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 FANCAO15360 1455 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 HOOK2Q96ED9 719 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 A6NJR5 290 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 IFNAR2P48551 515 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 POLR2FP61218 127 aaKnown RBP15.24■□□□□ 0.03
COL4A3-202ENST00000396578 YWHAGP61981 247 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL4A3-202ENST00000396578 ZYXQ15942 572 aaKnown RBP15.24■□□□□ 0.03
COL4A3-202ENST00000396578 CNOT10Q9H9A5 744 aaKnown RBP15.24■□□□□ 0.03
COL4A3-202ENST00000396578 SYF2O95926 243 aaKnown RBP15.24■□□□□ 0.03
COL4A3-202ENST00000396578 EPHB4P54760 987 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 C4orf50Q6ZRC1 276 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 METTL13Q8N6R0 699 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 SMCO2A6NFE2 343 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 DEUP1Q05D60 604 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 ANO3Q9BYT9 981 aa15.24■□□□□ 0.03
COL4A3-202ENST00000396578 SRGAP2BP0DMP2 458 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 TECP42680 631 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 NOSTRINQ8IVI9 506 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 N4BP2L2Q92802 583 aaPredicted RBP15.23■□□□□ 0.03
COL4A3-202ENST00000396578 MMS19Q96T76 1030 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 DSCC1Q9BVC3 393 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 ANLNQ9NQW6 1124 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 E2F5Q15329 346 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 KRT80Q6KB66 452 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 UHMK1Q8TAS1 419 aaKnown RBP15.23■□□□□ 0.03
COL4A3-202ENST00000396578 FAM89AQ96GI7 184 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 MRFAP1L1Q96HT8 127 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 PCDHA12Q9UN75 941 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 RAPGEF6Q8TEU7 1601 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 GSTA4O15217 222 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 ZBTB24O43167 697 aaPredicted RBP15.23■□□□□ 0.03
COL4A3-202ENST00000396578 PDE8AO60658 829 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 TRPA1O75762 1119 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 RPN1P04843 607 aaKnown RBP15.23■□□□□ 0.03
COL4A3-202ENST00000396578 PIK3CAP42336 1068 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 HP1BP3Q5SSJ5 553 aaPredicted RBP15.23■□□□□ 0.03
COL4A3-202ENST00000396578 METTL14Q9HCE5 456 aaKnown RBP15.23■□□□□ 0.03
COL4A3-202ENST00000396578 SSH2Q76I76 1423 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 K7ENM7 598 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 PDE1BQ01064 536 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 ME3Q16798 604 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 CEP19Q96LK0 163 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL4A3-202ENST00000396578 GGA1Q9UJY5 639 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 ZNF532Q9HCE3 1301 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 NPATQ14207 1427 aa15.23■□□□□ 0.03
COL4A3-202ENST00000396578 H0YCG3 227 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms