RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 A0A087X0B3 334 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 C21orf2O43822 256 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 MAGEF1Q9HAY2 307 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 BIN2Q9UBW5 565 aaPredicted RBP18.25■□□□□ 0.51
SNX6-202ENST00000396526 SLC1A4P43007 532 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 TMEM179Q6ZVK1 233 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 TBCKQ8TEA7 893 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 CTAGE1Q96RT6 745 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 GTPBP4Q9BZE4 634 aaKnown RBP18.24■□□□□ 0.51
SNX6-202ENST00000396526 DISC1Q9NRI5 854 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 MARCH6O60337 910 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 BMP6P22004 513 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 STIM1Q13586 685 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 SPATA1Q5VX52 437 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 CCDC112Q8NEF3 446 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 NAP1L4Q99733 375 aaKnown RBP18.24■□□□□ 0.51
SNX6-202ENST00000396526 AMPD3Q01432 767 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 DCAF4Q8WV16 495 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 C7orf43Q8WVR3 580 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 CUL5Q93034 780 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 CALML4Q96GE6 196 aa18.24■□□□□ 0.51
SNX6-202ENST00000396526 CACNB3P54284 484 aa18.23■□□□□ 0.51
SNX6-202ENST00000396526 CCP110O43303 1012 aa18.23■□□□□ 0.51
SNX6-202ENST00000396526 E2F4Q16254 413 aa18.23■□□□□ 0.51
SNX6-202ENST00000396526 ADGRF4Q8IZF3 695 aa18.23■□□□□ 0.51
SNX6-202ENST00000396526 LARGE2Q8N3Y3 721 aa18.23■□□□□ 0.51
SNX6-202ENST00000396526 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
SNX6-202ENST00000396526 COA7Q96BR5 231 aa18.23■□□□□ 0.51
SNX6-202ENST00000396526 DDX60LQ5H9U9 1706 aaKnown RBP18.23■□□□□ 0.51
SNX6-202ENST00000396526 ZBTB5O15062 677 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 KARSQ15046 597 aaKnown RBP18.22■□□□□ 0.51
SNX6-202ENST00000396526 RBM26Q5T8P6 1007 aaKnown RBP18.22■□□□□ 0.51
SNX6-202ENST00000396526 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 RASGRP2Q7LDG7 609 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 C10orf71Q711Q0 1435 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 ICA1Q05084 483 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 ABCB5Q2M3G0 1257 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 CABP7Q86V35 215 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 STAMQ92783 540 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 MKL1Q969V6 931 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 TMEM60Q9H2L4 133 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 TDRD3Q9H7E2 651 aaKnown RBP18.22■□□□□ 0.51
SNX6-202ENST00000396526 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 SYNRGQ9UMZ2 1314 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 CDK5RAP2Q96SN8 1893 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 IL17AQ16552 155 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 PDXDC2PQ6P474 469 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 FAM198AQ9UFP1 575 aa18.22■□□□□ 0.51
SNX6-202ENST00000396526 SPAG1Q07617 926 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 CLEC10AQ8IUN9 316 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 CDK5RAP3Q96JB5 506 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 EP400Q96L91 3159 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 UQCRHLA0A096LP55 91 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 DDTLA6NHG4 134 aaPredicted RBP18.21■□□□□ 0.51
SNX6-202ENST00000396526 KIF2AO00139 706 aaPredicted RBP18.21■□□□□ 0.51
SNX6-202ENST00000396526 ADAMTS3O15072 1205 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 UQCRHP07919 91 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 EEF2P13639 858 aaKnown RBP18.21■□□□□ 0.51
SNX6-202ENST00000396526 IKQ13123 557 aaPredicted RBP18.21■□□□□ 0.51
SNX6-202ENST00000396526 ZFPM1Q8IX07 1006 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 TRMT44Q8IYL2 757 aaKnown RBP18.21■□□□□ 0.51
SNX6-202ENST00000396526 BLZF1Q9H2G9 400 aa18.21■□□□□ 0.51
SNX6-202ENST00000396526 RPN1P04843 607 aaKnown RBP18.21■□□□□ 0.5
SNX6-202ENST00000396526 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.5
SNX6-202ENST00000396526 DLGAP5Q15398 846 aa18.21■□□□□ 0.5
SNX6-202ENST00000396526 MCTP2Q6DN12 878 aa18.21■□□□□ 0.5
SNX6-202ENST00000396526 VSTM4Q8IW00 320 aa18.21■□□□□ 0.5
SNX6-202ENST00000396526 PSTPIP2Q9H939 334 aa18.21■□□□□ 0.5
SNX6-202ENST00000396526 CDC25AP30304 524 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 TNNI2P48788 182 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 TRAF1Q13077 416 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 CALCRLQ16602 461 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 ZNF658Q5TYW1 1059 aaPredicted RBP18.2■□□□□ 0.5
SNX6-202ENST00000396526 KCTD1Q719H9 257 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 QSER1Q2KHR3 1735 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 POTEAQ6S8J7 498 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 PSMD1Q99460 953 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 HSD3B7Q9H2F3 369 aa18.2■□□□□ 0.5
SNX6-202ENST00000396526 COL11A2P13942 1736 aaPredicted RBP18.19■□□□□ 0.5
SNX6-202ENST00000396526 TNNT1P13805 278 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.19■□□□□ 0.5
SNX6-202ENST00000396526 HERC5Q9UII4 1024 aaKnown RBP18.19■□□□□ 0.5
SNX6-202ENST00000396526 TPM1P09493 284 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 ARID5BQ14865 1188 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 PTPN14Q15678 1187 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 TATDN1Q6P1N9 297 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 CSRNP1Q96S65 589 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 GCFC2P16383 781 aaKnown RBP18.19■□□□□ 0.5
SNX6-202ENST00000396526 ZNF18P17022 549 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 SLC16A2P36021 539 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 PPP1R2P41236 205 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 STX17P56962 302 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 PAK1Q13153 545 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 CUL4BQ13620 913 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 HSP90AA4PQ58FG1 418 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
SNX6-202ENST00000396526 RSBN1LQ6PCB5 846 aaPredicted RBP18.19■□□□□ 0.5
SNX6-202ENST00000396526 C16orf45Q96MC5 204 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms