RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TET3O43151 1660 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PFKFB2O60825 505 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PCCAP05165 728 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CMA1P23946 247 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 NSMFQ6X4W1 530 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 DNAJC10Q8IXB1 793 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PLCD3Q8N3E9 789 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 MYL10Q9BUA6 226 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 LMBRD1Q9NUN5 540 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 MAP3K15Q6ZN16 1313 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CASQ2O14958 399 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RNF8O76064 485 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 BRD1O95696 1058 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 APBA3O96018 575 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 FOSP01100 380 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 POLGP54098 1239 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RPS6KA2Q15349 733 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 FAM102BQ5T8I3 360 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 TRIM50Q86XT4 487 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RDH13Q8NBN7 331 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 AFG3L2Q9Y4W6 797 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CDC42BPAQ5VT25 1732 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RGS16O15492 202 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 XPOTO43592 962 aaKnown RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 BUB1BO60566 1050 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 STAM2O75886 525 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 MAN1A1P33908 653 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PLCB4Q15147 1175 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 ARHGAP44Q17R89 818 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PRR16Q569H4 304 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RINT1Q6NUQ1 792 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RPUSD2Q8IZ73 545 aaKnown RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 TRIM31Q9BZY9 425 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RAB20Q9NX57 234 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RGS12O14924 1447 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PPP6R2O75170 966 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 GABPB1Q06547 395 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 ATG3Q9NT62 314 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 DNAJC5BQ9UF47 199 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 AATKQ6ZMQ8 1374 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 ADCY10Q96PN6 1610 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CTNNA1P35221 906 aaKnown RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 BPIFB4P59827 614 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 BIRC2Q13490 618 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 WHAMMP3Q1A5X7 153 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 FAM47AQ5JRC9 791 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 BBOF1Q8ND07 529 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CNKSR1Q969H4 720 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 RNF26Q9BY78 433 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-204ENST00000395898 GPR108Q9NPR9 543 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 PODXL2Q9NZ53 605 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 CDC42BPGQ6DT37 1551 aa5.99□□□□□ -1.45
VPS13C-204ENST00000395898 EFCAB8A8MWE9 144 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 TTLL1O95922 423 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 BAG6P46379 1132 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SH3BGRP55822 239 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SMAP1Q8IYB5 467 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ANKRD35Q8N283 1001 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 OTUD7AQ8TE49 926 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 XPO4Q9C0E2 1151 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ST7Q9NRC1 585 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 YEATS2Q9ULM3 1422 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 PTGDRQ13258 359 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SDR42E1Q8WUS8 393 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 HVCN1Q96D96 273 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 KRIT1O00522 736 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 LMNB1P20700 586 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 POMGNT1Q8WZA1 660 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 HAUS4Q9H6D7 363 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 IFT122Q9HBG6 1241 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 NLRC4Q9NPP4 1024 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 UGGT1Q9NYU2 1555 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ZNF804BA4D1E1 1349 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 XDHP47989 1333 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 IL6STP40189 918 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 PTK2Q05397 1052 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SULF1Q8IWU6 871 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 NELFCDQ8IXH7 590 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 PSMB7Q99436 277 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SLF1Q9BQI6 1058 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 BLZF1Q9H2G9 400 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 NOC2LQ9Y3T9 749 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ZCCHC11Q5TAX3 1644 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 KCNK3O14649 394 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 PFKFB1P16118 471 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 ADKP55263 362 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 PPP2R5DQ14738 602 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 KRT71Q3SY84 523 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 C10orf76Q5T2E6 689 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 TRIM11Q96F44 468 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SPZ1Q9BXG8 430 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 FAM114A2Q9NRY5 505 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 HESX1Q9UBX0 185 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 TNKSO95271 1327 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 GCFC2P16383 781 aaKnown RBP5.98□□□□□ -1.45
VPS13C-204ENST00000395898 HSPA2P54652 639 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 KIF22Q14807 665 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 SPATA1Q5VX52 437 aa5.98□□□□□ -1.45
VPS13C-204ENST00000395898 FAM160B1Q5W0V3 765 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms