RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SPATA32Q96LK8 384 aa23.44■■□□□ 1.34
VCPKMT-202ENST00000395860 USP28Q96RU2 1077 aa23.44■■□□□ 1.34
VCPKMT-202ENST00000395860 RPAP3Q9H6T3 665 aaPredicted RBP23.44■■□□□ 1.34
VCPKMT-202ENST00000395860 FBXO28Q9NVF7 368 aa23.44■■□□□ 1.34
VCPKMT-202ENST00000395860 ESYT2A0FGR8 921 aa23.43■■□□□ 1.34
VCPKMT-202ENST00000395860 PPATQ06203 517 aa23.43■■□□□ 1.34
VCPKMT-202ENST00000395860 ERO1BQ86YB8 467 aa23.43■■□□□ 1.34
VCPKMT-202ENST00000395860 CNKSR2Q8WXI2 1034 aa23.43■■□□□ 1.34
VCPKMT-202ENST00000395860 AMNQ9BXJ7 453 aa23.43■■□□□ 1.34
VCPKMT-202ENST00000395860 FBXO11Q86XK2 927 aa23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 TNFRSF25Q93038 417 aa23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 SLF1Q9BQI6 1058 aa23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 FTOQ9C0B1 505 aaKnown RBP eCLIP23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 PCDHA1Q9Y5I3 950 aa23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 SPDYE5A6NIY4 337 aa23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 PRPF38AQ8NAV1 312 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 OTUD5Q96G74 571 aa23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 RANBP17Q9H2T7 1088 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-202ENST00000395860 ADAMTS3O15072 1205 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 FLOT1O75955 427 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 ADCY7P51828 1080 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 RILPL1Q5EBL4 403 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 SH3D19Q5HYK7 790 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 LDLRAD1Q5T700 205 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 BICD2Q8TD16 824 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 LEO1Q8WVC0 666 aaPredicted RBP23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 TRPM7Q96QT4 1865 aa23.41■■□□□ 1.34
VCPKMT-202ENST00000395860 POLR3EQ9NVU0 708 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 RTEL1Q9NZ71 1219 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 PCDHA6Q9UN73 950 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 PCDHA8Q9Y5H6 950 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 CLIC4Q9Y696 253 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 LOC285556D6RIA3 1793 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 ELP1O95163 1332 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 M0R2N6 131 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 FKBP1BP68106 108 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 TRAF1Q13077 416 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 USH1GQ495M9 461 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 EARS2Q5JPH6 523 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 ANO1Q5XXA6 986 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 CHADLQ6NUI6 762 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 CCDC174Q6PII3 467 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 PIK3AP1Q6ZUJ8 805 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 RASGRP4Q8TDF6 673 aa23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 NOL7Q9UMY1 257 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-202ENST00000395860 CCDC194A0A1B0GVG4 234 aa23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 FAM205CA6NFA0 338 aa23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 UNCXA6NJT0 531 aa23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 IRF6O14896 467 aa23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 CELF2O95319 508 aaKnown RBP23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 OPTNQ96CV9 577 aa23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 GBA2Q9HCG7 927 aaPredicted RBP23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 RIC8AQ9NPQ8 531 aa23.39■■□□□ 1.33
VCPKMT-202ENST00000395860 PPIL2Q13356 520 aa23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 STK38Q15208 465 aa23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 NOM1Q5C9Z4 860 aaKnown RBP23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 REXO1Q8N1G1 1221 aaKnown RBP23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 C2orf69Q8N8R5 385 aa23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 CUL5Q93034 780 aa23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 RCOR1Q9UKL0 485 aa23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 PPP1R9AQ9ULJ8 1098 aa23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 RLFQ13129 1914 aa23.38■■□□□ 1.33
VCPKMT-202ENST00000395860 YEATS4O95619 227 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 NASPP49321 788 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 TOB1P50616 345 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 MRPL12P52815 198 aaKnown RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 SF3A1Q15459 793 aaKnown RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 SLC10A4Q96EP9 437 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 PSTPIP2Q9H939 334 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 SMCHD1A6NHR9 2005 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 CXCL11O14625 94 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 TRAK2O60296 914 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 GADD45BO75293 160 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 ATP2B1P20020 1258 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 SKOR2Q2VWA4 1001 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 GLT8D2Q9H1C3 349 aa23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 BIN2Q9UBW5 565 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 CTDP1Q9Y5B0 961 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 DDX49Q9Y6V7 483 aaKnown RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 COL11A1P12107 1806 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-202ENST00000395860 KRT25Q7Z3Z0 450 aa23.36■■□□□ 1.33
VCPKMT-202ENST00000395860 LINC00301Q8NCQ3 95 aa23.36■■□□□ 1.33
VCPKMT-202ENST00000395860 A0A0G2JLL6 359 aaPredicted RBP23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L15C9J2P7 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L13C9JLJ4 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L11C9JVI0 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L18D6R9N7 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L22D6RA61 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L17D6RBQ6 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L19D6RCP7 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L20D6RJB6 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 ITGBL1O95965 494 aaPredicted RBP23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 UBE2HP62256 183 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 USP17L24Q0WX57 530 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 TPRNQ4KMQ1 711 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 GADL1Q6ZQY3 521 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 CATSPERGQ6ZRH7 1159 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 PRRT2Q7Z6L0 340 aaPredicted RBP23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 GPBP1L1Q9HC44 474 aaPredicted RBP23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 KCNH4Q9UQ05 1017 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms