RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ZMYND12Q9H0C1 365 aa20.24■□□□□ 0.83
SREBF1-204ENST00000395756 TDRD3Q9H7E2 651 aaKnown RBP20.24■□□□□ 0.83
SREBF1-204ENST00000395756 NONOQ15233 471 aaKnown RBP eCLIP20.24■□□□□ 0.83
SREBF1-204ENST00000395756 SPATA20Q8TB22 786 aa20.24■□□□□ 0.83
SREBF1-204ENST00000395756 TEX33O43247 280 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 GDF11O95390 407 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 GNA11P29992 359 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 PDXDC2PQ6P474 469 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 PODNQ7Z5L7 613 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 FLAD1Q8NFF5 587 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 PRIMPOLQ96LW4 560 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 TRIM34Q9BYJ4 488 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 CBX1P83916 185 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 CEP135Q66GS9 1140 aa20.23■□□□□ 0.83
SREBF1-204ENST00000395756 FAM177A1Q8N128 213 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-204ENST00000395756 CCAR2Q8N163 923 aaKnown RBP20.23■□□□□ 0.83
SREBF1-204ENST00000395756 REXO1Q8N1G1 1221 aaKnown RBP20.23■□□□□ 0.83
SREBF1-204ENST00000395756 LONP1P36776 959 aaKnown RBP20.22■□□□□ 0.83
SREBF1-204ENST00000395756 CCT6AP40227 531 aaKnown RBP20.22■□□□□ 0.83
SREBF1-204ENST00000395756 TNNI2P48788 182 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 VSTM4Q8IW00 320 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-204ENST00000395756 ADGRF4Q8IZF3 695 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 SYNRGQ9UMZ2 1314 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 USP17L10C9JJH3 530 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 TERF1P54274 439 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 E4F1Q66K89 784 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-204ENST00000395756 CCDC12Q8WUD4 166 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-204ENST00000395756 GSDMAQ96QA5 445 aa20.22■□□□□ 0.83
SREBF1-204ENST00000395756 PPP1R3GB7ZBB8 358 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 SAMD1Q6SPF0 538 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-204ENST00000395756 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 CCDC150Q8NCX0 1101 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 IGSF3O75054 1194 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 ARL6IP4Q66PJ3 421 aaKnown RBP20.21■□□□□ 0.83
SREBF1-204ENST00000395756 NEK8Q86SG6 692 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 TMX1Q9H3N1 280 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 DNAJC18Q9H819 358 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 DISC1Q9NRI5 854 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 HHIPL2Q6UWX4 724 aa20.21■□□□□ 0.83
SREBF1-204ENST00000395756 PES1O00541 588 aaKnown RBP20.2■□□□□ 0.82
SREBF1-204ENST00000395756 ZNF18P17022 549 aa20.2■□□□□ 0.82
SREBF1-204ENST00000395756 NAA30Q147X3 362 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-204ENST00000395756 NUP88Q99567 741 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-204ENST00000395756 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
SREBF1-204ENST00000395756 SUGT1Q9Y2Z0 365 aa20.2■□□□□ 0.82
SREBF1-204ENST00000395756 LAMB1P07942 1786 aa20.2■□□□□ 0.82
SREBF1-204ENST00000395756 TDP2O95551 362 aa20.2■□□□□ 0.82
SREBF1-204ENST00000395756 RPN1P04843 607 aaKnown RBP20.2■□□□□ 0.82
SREBF1-204ENST00000395756 IKQ13123 557 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-204ENST00000395756 NAALADL2Q58DX5 795 aa20.2■□□□□ 0.82
SREBF1-204ENST00000395756 LRRC15Q8TF66 581 aa20.2■□□□□ 0.82
SREBF1-204ENST00000395756 MAST2Q6P0Q8 1798 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 PPIP5K2O43314 1243 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 NRDCO43847 1150 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 DACT2Q5SW24 774 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 KRT25Q7Z3Z0 450 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 SCAF8Q9UPN6 1271 aaKnown RBP20.19■□□□□ 0.82
SREBF1-204ENST00000395756 TRIM49BA6NDI0 452 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 OR52Z1P0C646 297 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 EEF2P13639 858 aaKnown RBP20.19■□□□□ 0.82
SREBF1-204ENST00000395756 TAL1P17542 331 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-204ENST00000395756 SEPT2Q15019 361 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 CERKLQ49MI3 558 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-204ENST00000395756 SPATA1Q5VX52 437 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 VPS16Q9H269 839 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 RIOX1Q9H6W3 641 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 FAM198AQ9UFP1 575 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 DYNC1I1O14576 645 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 GTPBP6O43824 516 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-204ENST00000395756 RAD17O75943 681 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 ERCC5P28715 1186 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-204ENST00000395756 GALNT17Q6IS24 598 aa20.19■□□□□ 0.82
SREBF1-204ENST00000395756 CLRN2A0PK11 232 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 PPP1R11O60927 126 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-204ENST00000395756 PLCG1P19174 1290 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 ADCY7P51828 1080 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 ZNF543Q08ER8 600 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 SLC15A2Q16348 729 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 SH3BP5LQ7L8J4 393 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 CABP7Q86V35 215 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 DAGLBQ8NCG7 672 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.18■□□□□ 0.82
SREBF1-204ENST00000395756 V9GYY5 206 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-204ENST00000395756 STRIP1Q5VSL9 837 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 HPS3Q969F9 1004 aa20.18■□□□□ 0.82
SREBF1-204ENST00000395756 PRMT6Q96LA8 375 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-204ENST00000395756 MARCH6O60337 910 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 PRCPP42785 496 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 SLC1A4P43007 532 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 ASPRV1Q53RT3 343 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 SPECC1LQ69YQ0 1117 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 SPICE1Q8N0Z3 855 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 NELFBQ8WX92 580 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 ZDHHC15Q96MV8 337 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 SWAP70Q9UH65 585 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 DDX60LQ5H9U9 1706 aaKnown RBP20.17■□□□□ 0.82
SREBF1-204ENST00000395756 NAV1Q8NEY1 1877 aa20.17■□□□□ 0.82
SREBF1-204ENST00000395756 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms