RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 GPC4O75487 556 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 P4HA1P13674 534 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 CXCR5P32302 372 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 MESDQ14696 234 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 KRT27Q7Z3Y8 459 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 MRFAP1L1Q96HT8 127 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 NUP58Q9BVL2 599 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 GGA1Q9UJY5 639 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 ABCC5O15440 1437 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 ATAD2BQ9ULI0 1458 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 EEF1DP29692 281 aaKnown RBP13.4□□□□□ -0.26
SIN3A-202ENST00000394947 NSUN2Q08J23 767 aaKnown RBP eCLIP13.4□□□□□ -0.26
SIN3A-202ENST00000394947 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 HPS4Q9NQG7 708 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.4□□□□□ -0.26
SIN3A-202ENST00000394947 LRRIQ4A6NIV6 560 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 KCNJ18B7U540 433 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 HLA-DPA1P20036 260 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 HMGB2P26583 209 aaKnown RBP13.4□□□□□ -0.26
SIN3A-202ENST00000394947 PDE6CP51160 858 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 PDE1BQ01064 536 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 KCNJ12Q14500 433 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 SMAP1Q8IYB5 467 aaPredicted RBP13.4□□□□□ -0.26
SIN3A-202ENST00000394947 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.26
SIN3A-202ENST00000394947 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
SIN3A-202ENST00000394947 IFT88Q13099 833 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 SNCBQ16143 134 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 PLEKHM2Q8IWE5 1019 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 HAUS1Q96CS2 278 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 USP26Q9BXU7 913 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 Q9H521 79 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 RTEL1Q9NZ71 1219 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 OSTNP61366 133 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 NONOQ15233 471 aaKnown RBP eCLIP13.39□□□□□ -0.275e-7■■■■■ 27.1
SIN3A-202ENST00000394947 DPP8Q6V1X1 898 aaPredicted RBP13.39□□□□□ -0.27
SIN3A-202ENST00000394947 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 TCP11Q8WWU5 503 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 DBNDD2Q9BQY9 259 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 RASSF7Q02833 373 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 MORC3Q14149 939 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 A6NJR5 290 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 TNNC2P02585 160 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 RLBP1P12271 317 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
SIN3A-202ENST00000394947 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 CYP4F22Q6NT55 531 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 BCAS4Q8TDM0 211 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 MRFAP1Q9Y605 127 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 hCG_2014768A0A024R1R8 64 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 UBE3AQ05086 875 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 PCDHB4Q9Y5E5 795 aa13.39□□□□□ -0.27
SIN3A-202ENST00000394947 ZRANB2O95218 330 aaKnown RBP eCLIP13.38□□□□□ -0.27
SIN3A-202ENST00000394947 TUBB4BP68371 445 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 GUCY2DQ02846 1103 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 TBCCQ15814 346 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 G2E3Q7L622 706 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 IGF1RP08069 1367 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 KCNA1Q09470 495 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
SIN3A-202ENST00000394947 PRPSAP1Q14558 356 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 ZC4H2Q9NQZ6 224 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 BCAP29Q9UHQ4 241 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 DAPK1P53355 1430 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 HADHQ16836 314 aaKnown RBP13.38□□□□□ -0.27
SIN3A-202ENST00000394947 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
SIN3A-202ENST00000394947 INHBAP08476 426 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 NOS1P29475 1434 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 STAT1P42224 750 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 YWHAHQ04917 246 aaPredicted RBP13.38□□□□□ -0.27
SIN3A-202ENST00000394947 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 PARP2Q9UGN5 583 aa13.38□□□□□ -0.27
SIN3A-202ENST00000394947 XRCC5P13010 732 aaKnown RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 GARSP41250 739 aaKnown RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 POLA2Q14181 598 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 GOLGA8SH3BPF8 625 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 CUTAO60888 179 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 SOX5P35711 763 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 TFAP4Q01664 338 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 OTULINQ96BN8 352 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 EDC3Q96F86 508 aaKnown RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 CAPN11Q9UMQ6 739 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 TROQ12816 1431 aaPredicted RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 PUM3Q15397 648 aaKnown RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 MAP3K21Q5TCX8 1036 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 TMTC1Q8IUR5 882 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 TEKT1Q969V4 418 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 PCIF1Q9H4Z3 704 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 AKT3Q9Y243 479 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms