RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CUEDC2Q9H467 287 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 ABCB6Q9NP58 842 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 FAM207AQ9NSI2 230 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 GDAQ9Y2T3 454 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 B4DLN1 442 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 TRAF5O00463 557 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 ARID5AQ03989 594 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 TYW1BQ6NUM6 668 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 TEX11Q8IYF3 940 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 RETREG2Q8NC44 543 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 DHTKD1Q96HY7 919 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 GDAP1L1Q96MZ0 367 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 ADD3Q9UEY8 706 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 FAM205CA6NFA0 338 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 ZCCHC17Q9NP64 241 aaKnown RBP13□□□□□ -0.33
UBE2D3-209ENST00000394804 FAN1Q9Y2M0 1017 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 LAD1O00515 517 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 ACTN2P35609 894 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 CASP8Q14790 479 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.333e-6■□□□□ 8.1
UBE2D3-209ENST00000394804 REXO1Q8N1G1 1221 aaKnown RBP13□□□□□ -0.33
UBE2D3-209ENST00000394804 CNOT6LQ96LI5 555 aaKnown RBP13□□□□□ -0.33
UBE2D3-209ENST00000394804 SMCO2A6NFE2 343 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 ATP2C1P98194 919 aaPredicted RBP13□□□□□ -0.33
UBE2D3-209ENST00000394804 NOX5Q96PH1 765 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 ADAM21Q9UKJ8 722 aa13□□□□□ -0.33
UBE2D3-209ENST00000394804 RFC4P35249 363 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 CFAP58Q5T655 872 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 DYMQ7RTS9 669 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 THAP9Q9H5L6 903 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 CYP2C19P33261 490 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 DNAJC21Q5F1R6 531 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 SNX29Q8TEQ0 813 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 PSMB7Q99436 277 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 CALCRLQ16602 461 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 RAD9BQ6WBX8 426 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 RRAGAQ7L523 313 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 NEK8Q86SG6 692 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 MAPKAPK5Q8IW41 473 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 MB21D1Q8N884 522 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 TGFBRAP1Q8WUH2 860 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 P2RX5Q93086 422 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 PHF20Q9BVI0 1012 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 FHOD1Q9Y613 1164 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 PFKFB3Q16875 520 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 FOXP4Q8IVH2 680 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 IFT81Q8WYA0 676 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 AK8Q96MA6 479 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 SELENOOQ9BVL4 669 aa12.99□□□□□ -0.33
UBE2D3-209ENST00000394804 LGALS16A8MUM7 142 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 DPYDQ12882 1025 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 TRIM65Q6PJ69 517 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 CCDC65Q8IXS2 484 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 ERMNQ8TAM6 284 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 TCP1P17987 556 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 TECP42680 631 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 TNNC1P63316 161 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 ZBED6P86452 979 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 RAPGEF1Q13905 1077 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 BCCIPQ9P287 314 aaKnown RBP eCLIP12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 FAM237AA0A1B0GTK4 181 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 HLA-DOAP06340 250 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 CCNE1P24864 410 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 PRCPP42785 496 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 RBM5P52756 815 aaKnown RBP eCLIP12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 GYS2P54840 703 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 LRRN4CLQ8ND94 238 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 FAM204AQ9H8W3 233 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 LIMA1Q9UHB6 759 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 HYOU1Q9Y4L1 999 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 EP400Q96L91 3159 aa12.98□□□□□ -0.33
UBE2D3-209ENST00000394804 ITIH6Q6UXX5 1313 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 PLA2G4AP47712 749 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 FXR1P51114 621 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 PICALMQ13492 652 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 LMO7Q8WWI1 1683 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
UBE2D3-209ENST00000394804 ZNF18P17022 549 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms