RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SLC8A1P32418 973 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 APBA1Q02410 837 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 PTK2BQ14289 1009 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 UHRF1BP1Q6BDS2 1440 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 ARMCX2Q7L311 632 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 CCDC186Q7Z3E2 898 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 CNKSR1Q969H4 720 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 TEKT3Q9BXF9 490 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 EFCC1Q9HA90 598 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 PARD3Q8TEW0 1356 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 NVLO15381 856 aaKnown RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 NSFP46459 744 aaKnown RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 EIF2B5Q13144 721 aaKnown RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 TUBB6Q9BUF5 446 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 SPDL1Q96EA4 605 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 PPIP5K2O43314 1243 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 CFBP00751 764 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 RAP1GDS1P52306 607 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 PNMA8AQ86V59 439 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 OGFRQ9NZT2 677 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 SART1O43290 800 aaKnown RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 OCM2P0CE71 109 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 OCMP0CE72 109 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 GIPC2Q8TF65 315 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 ATP6V1E2Q96A05 226 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 SCHIP1Q9P0W5 487 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 POTEB3A0JP26 581 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 CCDC151A5D8V7 595 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 hCG_1984214I3L0E3 225 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 SUPT20HL1Q3ZLR7 823 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 POTEBQ6S5H4 581 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 PIK3AP1Q6ZUJ8 805 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 DPP9Q86TI2 863 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 SUCLA2Q9P2R7 463 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-205ENST00000394768 STK17AQ9UEE5 414 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 ZKSCAN5Q9Y2L8 839 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 COL4A3BPQ9Y5P4 624 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 KIF1BO60333 1816 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 BSPRYQ5W0U4 402 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 ANO1Q5XXA6 986 aa8.12□□□□□ -1.11
SYNE2-205ENST00000394768 PIK3C2GO75747 1445 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 FOSP01100 380 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 DNM1Q05193 864 aaKnown RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 HSP90AA4PQ58FG1 418 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 ITGA6P23229 1130 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 ACBD5Q5T8D3 534 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 TADA2BQ86TJ2 420 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 CPXCR1Q8N123 301 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 FBXL13Q8NEE6 735 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 GNAT1P11488 350 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 ADCY8P40145 1251 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 CUEDC2Q9H467 287 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 E9PMD0 336 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 MEIS1O00470 390 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 PIK3CAP42336 1068 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 GRIN1Q05586 938 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 RAB42Q8N4Z0 105 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 RNF169Q8NCN4 708 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 KRT87PA6NCN2 255 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 RECQLP46063 649 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 PTK2Q05397 1052 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 FAM102BQ5T8I3 360 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 TESPA1A2RU30 521 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 TXKP42681 527 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 CHRNA2Q15822 529 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 NFATC2IPQ8NCF5 419 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 SNX25Q9H3E2 840 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 XAB2Q9HCS7 855 aaKnown RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 STX17P56962 302 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 PDE1CQ14123 709 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 USH1GQ495M9 461 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 CCDC13Q8IYE1 715 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 TMCO5AQ8N6Q1 288 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 MTBPQ96DY7 904 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 YEATS2Q9ULM3 1422 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 INHBAP08476 426 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 MAP3K10Q02779 954 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 TSTA3Q13630 321 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-205ENST00000394768 ALCAMQ13740 583 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 KRT71Q3SY84 523 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 TRIM62Q9BVG3 475 aa8.11□□□□□ -1.11
SYNE2-205ENST00000394768 MCF2LO15068 1137 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 CEP104O60308 925 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 HSPA6P17066 643 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 RAD51AP2Q09MP3 1159 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 ZNF174Q15697 407 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 FAM178BQ8IXR5 827 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 N4BP2L2Q92802 583 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 CENPKQ9BS16 269 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 SAP30BPQ9UHR5 308 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 EYA2O00167 538 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 ELF1P32519 619 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 RYBPQ8N488 228 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 FGD4Q96M96 766 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 SERPINI1Q99574 410 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms