RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 CLIP2Q9UDT6 1046 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 hCG_1642624A0A1W2PR95 340 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 TRIM75PA6NK02 468 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
SRSF5-201ENST00000394366 LBX1P52954 281 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 SREBF2Q12772 1141 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 UVSSAQ2YD98 709 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 AXDND1Q5T1B0 1012 aaPredicted RBP15.28■□□□□ 0.04
SRSF5-201ENST00000394366 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
SRSF5-201ENST00000394366 ENGASEQ8NFI3 743 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 RBSNQ9H1K0 784 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 RIOX1Q9H6W3 641 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 CABP5Q9NP86 173 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 PCDHA4Q9UN74 947 aa15.28■□□□□ 0.04
SRSF5-201ENST00000394366 CYTH3O43739 400 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 CAVIN2O95810 425 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 SNW1Q13573 536 aaKnown RBP15.27■□□□□ 0.03
SRSF5-201ENST00000394366 USP17L2Q6R6M4 530 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 BLIDQ8IZY5 108 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 OXER1Q8TDS5 423 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 TNFRSF25Q93038 417 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.03
SRSF5-201ENST00000394366 FUCA2Q9BTY2 467 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 RNF186Q9NXI6 227 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 TSKSQ9UJT2 592 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 ZNF112Q9UJU3 913 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 MTMR7Q9Y216 660 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 MYH4Q9Y623 1939 aa15.27■□□□□ 0.03
SRSF5-201ENST00000394366 PCNTO95613 3336 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 FAM237AA0A1B0GTK4 181 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 MANSC4A6NHS7 340 aaPredicted RBP15.26■□□□□ 0.03
SRSF5-201ENST00000394366 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 GNA11P29992 359 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 GJA5P36382 358 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 TM4SF4P48230 202 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 TOB1P50616 345 aaPredicted RBP15.26■□□□□ 0.03
SRSF5-201ENST00000394366 ZNF543Q08ER8 600 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 NPY5RQ15761 445 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 FMR1NBQ8N0W7 255 aaPredicted RBP15.26■□□□□ 0.03
SRSF5-201ENST00000394366 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
SRSF5-201ENST00000394366 DCAF4Q8WV16 495 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 SHISA4Q96DD7 197 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 TIGD1Q96MW7 591 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 PRDM10Q9NQV6 1147 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 SAGE1Q9NXZ1 904 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 SNCAIPQ9Y6H5 919 aa15.26■□□□□ 0.03
SRSF5-201ENST00000394366 TRPA1O75762 1119 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 GOLGA8HP0CJ92 632 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 INPP5BP32019 993 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 INHBEP58166 350 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 WWC2Q6AWC2 1192 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 SASS6Q6UVJ0 657 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 HEATR3Q7Z4Q2 680 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 LRRC47Q8N1G4 583 aaKnown RBP15.25■□□□□ 0.03
SRSF5-201ENST00000394366 C6orf50Q9HD87 102 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 ESYT2A0FGR8 921 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 STXBP3O00186 592 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 TBC1D12O60347 775 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 PTPREP23469 700 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 MARCKSP29966 332 aaPredicted RBP15.25■□□□□ 0.03
SRSF5-201ENST00000394366 MAP3K10Q02779 954 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 ICA1Q05084 483 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 CAMK4Q16566 473 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 COL13A1Q5TAT6 717 aaPredicted RBP15.25■□□□□ 0.03
SRSF5-201ENST00000394366 RESP18Q5W5W9 173 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 PPP1R18Q6NYC8 613 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 PIBF1Q8WXW3 757 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 FERMT2Q96AC1 680 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 OTUD5Q96G74 571 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 ZMYND12Q9H0C1 365 aa15.25■□□□□ 0.03
SRSF5-201ENST00000394366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.25■□□□□ 0.037e-75■■■■■ 34.3
SRSF5-201ENST00000394366 SRPRBQ9Y5M8 271 aaKnown RBP15.25■□□□□ 0.03
SRSF5-201ENST00000394366 A0A1B0GVL5 298 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 PFKFB1P16118 471 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 NDUFA8P51970 172 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 NAPAP54920 295 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 TTC38Q5R3I4 469 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 GMCL1P1Q8NEA9 526 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 GPKOWQ92917 476 aaPredicted RBP eCLIP15.24■□□□□ 0.036e-13■■□□□ 11.8
SRSF5-201ENST00000394366 FAM13BQ9NYF5 915 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 PCDHB6Q9Y5E3 794 aa15.24■□□□□ 0.03
SRSF5-201ENST00000394366 CCDC194A0A1B0GVG4 234 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 PHF20L1A8MW92 1017 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 SLURP2P0DP57 97 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 EEF2P13639 858 aaKnown RBP15.23■□□□□ 0.03
SRSF5-201ENST00000394366 SYKP43405 635 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 ATP2B2Q01814 1243 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 TYRO3Q06418 890 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 SLC35G1Q2M3R5 365 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 NOL9Q5SY16 702 aaKnown RBP15.23■□□□□ 0.03
SRSF5-201ENST00000394366 SDF4Q9BRK5 362 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
SRSF5-201ENST00000394366 FBXO2Q9UK22 296 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms