RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 TMTC3Q6ZXV5 915 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 MED15Q96RN5 788 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 CEP89Q96ST8 783 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 PHF20Q9BVI0 1012 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 BRIP1Q9BX63 1249 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 RAB21Q9UL25 225 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 SRPRBQ9Y5M8 271 aaKnown RBP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 EBAG9O00559 213 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 TEX33O43247 280 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 RPS6KA4O75676 772 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 INPP5BP32019 993 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 PLCD1P51178 756 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 MSANTD4Q8NCY6 345 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 BCAS4Q8TDM0 211 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 ACBD3Q9H3P7 528 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 HOOK1Q9UJC3 728 aaKnown RBP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 BCL9LQ86UU0 1499 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 ECM29Q5VYK3 1845 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 PP2D1A8MPX8 630 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 ACTN4O43707 911 aaKnown RBP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 CPP00450 1065 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 EIF6P56537 245 aaKnown RBP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 GBP6Q6ZN66 633 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 ZNF622Q969S3 477 aaKnown RBP eCLIP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 NYXQ9GZU5 481 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 HDAC6Q9UBN7 1215 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 PLCH1Q4KWH8 1693 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 RIMBP2O15034 1052 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 PRPF3O43395 683 aaKnown RBP11.16□□□□□ -0.62
PSEN1-204ENST00000394164 SRGAP2O75044 1071 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 GIMAP7Q8NHV1 300 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 ANAPC4Q9UJX5 808 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 CEP131Q9UPN4 1083 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 TM4SF1P30408 202 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 CCT6AP40227 531 aaKnown RBP11.16□□□□□ -0.62
PSEN1-204ENST00000394164 RBL2Q08999 1139 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 CNBD1Q8NA66 436 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 PNMA1Q8ND90 353 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 PAGE5Q96GU1 130 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 IL17RBQ9NRM6 502 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 TFR2Q9UP52 801 aa11.16□□□□□ -0.62
PSEN1-204ENST00000394164 LRP5O75197 1615 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 CNTNAP5Q8WYK1 1306 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 PHLPP1O60346 1717 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 PES1O00541 588 aaKnown RBP11.15□□□□□ -0.62
PSEN1-204ENST00000394164 TOM1O60784 492 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 SCG2P13521 617 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 PDE6BP35913 854 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 TBX2Q13207 712 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-204ENST00000394164 RPAINQ86UA6 219 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 KIRREL3Q8IZU9 778 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 TRIM10Q9UDY6 481 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 FAM205AQ6ZU69 1335 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 AKR1B15C9JRZ8 316 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-204ENST00000394164 RAD21O60216 631 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 UFL1O94874 794 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 SLURP2P0DP57 97 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 PICALMQ13492 652 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 NPY5RQ15761 445 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
PSEN1-204ENST00000394164 RCSD1Q6JBY9 416 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 TYW1BQ6NUM6 668 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 CLEC10AQ8IUN9 316 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 ANKRD2Q9GZV1 360 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 MED4Q9NPJ6 270 aa11.15□□□□□ -0.62
PSEN1-204ENST00000394164 MYH6P13533 1939 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 IRAK1P51617 712 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 GNGT1P63211 74 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 STIM1Q13586 685 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 PPFIBP1Q86W92 1011 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 CRACR2AQ9BSW2 395 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 HPCAL4Q9UM19 191 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 C6orf229H3BNL8 230 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 PRPF6O94906 941 aaKnown RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 MORC3Q14149 939 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 IL17AQ16552 155 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 INF2Q27J81 1249 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 SLC10A5Q5PT55 438 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 ZNF444Q8N0Y2 327 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 RPGRQ92834 1020 aaKnown RBP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 LRRC4BQ9NT99 713 aa11.14□□□□□ -0.63
PSEN1-204ENST00000394164 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
PSEN1-204ENST00000394164 CACNA1SQ13698 1873 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms