RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SH3GLB2Q9NR46 395 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 NYAP2Q9P242 653 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.33
MKS1-202ENST00000393119 PP2D1A8MPX8 630 aa17.08■□□□□ 0.33
MKS1-202ENST00000393119 DPCR1Q3MIW9 517 aa17.08■□□□□ 0.33
MKS1-202ENST00000393119 C4orf32Q8N8J7 132 aa17.08■□□□□ 0.33
MKS1-202ENST00000393119 STAMQ92783 540 aa17.08■□□□□ 0.33
MKS1-202ENST00000393119 MKL1Q969V6 931 aa17.08■□□□□ 0.33
MKS1-202ENST00000393119 PSME4Q14997 1843 aa17.08■□□□□ 0.32
MKS1-202ENST00000393119 EDIL3O43854 480 aa17.08■□□□□ 0.32
MKS1-202ENST00000393119 CALML3P27482 149 aa17.08■□□□□ 0.32
MKS1-202ENST00000393119 SYMPKQ92797 1274 aaKnown RBP17.08■□□□□ 0.32
MKS1-202ENST00000393119 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
MKS1-202ENST00000393119 FZD9O00144 591 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 ZNF165P49910 485 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 TNIP1Q15025 636 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 LETM2Q2VYF4 491 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 GREB1LQ9C091 1923 aaPredicted RBP17.07■□□□□ 0.32
MKS1-202ENST00000393119 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
MKS1-202ENST00000393119 MTMR14Q8NCE2 650 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 GJA10Q969M2 543 aa17.07■□□□□ 0.32
MKS1-202ENST00000393119 ADCY5O95622 1261 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
MKS1-202ENST00000393119 QRICH1Q2TAL8 776 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 KRBA2Q6ZNG9 492 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 DHX58Q96C10 678 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 HACL1Q9UJ83 578 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 FAM237AA0A1B0GTK4 181 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 MYO1BO43795 1136 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 TRPM4Q8TD43 1214 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 TBCKQ8TEA7 893 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 TEPSINQ96N21 525 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 PLIN2Q99541 437 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
MKS1-202ENST00000393119 MYH4Q9Y623 1939 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 ZNF280AP59817 542 aaPredicted RBP17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USH1GQ495M9 461 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 USP17L6PQ6QN14 398 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 DAGLBQ8NCG7 672 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
MKS1-202ENST00000393119 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
MKS1-202ENST00000393119 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
MKS1-202ENST00000393119 ZBTB5O15062 677 aa17.04■□□□□ 0.32
MKS1-202ENST00000393119 CCNT1O60563 726 aaKnown RBP17.04■□□□□ 0.32
MKS1-202ENST00000393119 MSNP26038 577 aaKnown RBP17.04■□□□□ 0.32
MKS1-202ENST00000393119 P2RX7Q99572 595 aaKnown RBP17.04■□□□□ 0.32
MKS1-202ENST00000393119 CTAGE5O15320 804 aa17.04■□□□□ 0.32
MKS1-202ENST00000393119 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
MKS1-202ENST00000393119 AFMP43652 599 aa17.04■□□□□ 0.32
MKS1-202ENST00000393119 MDM2Q00987 491 aaPredicted RBP17.04■□□□□ 0.32
MKS1-202ENST00000393119 IQCB1Q15051 598 aa17.04■□□□□ 0.32
MKS1-202ENST00000393119 CDC37Q16543 378 aaPredicted RBP17.04■□□□□ 0.32
MKS1-202ENST00000393119 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
MKS1-202ENST00000393119 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
MKS1-202ENST00000393119 PCDHA5Q9Y5H7 936 aa17.04■□□□□ 0.32
MKS1-202ENST00000393119 ACTN4O43707 911 aaKnown RBP17.03■□□□□ 0.32
MKS1-202ENST00000393119 BMP6P22004 513 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 EPS15P42566 896 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
MKS1-202ENST00000393119 FAM83BQ5T0W9 1011 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 CAP2P40123 477 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 STX1AQ16623 288 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 DHX40Q8IX18 779 aaKnown RBP17.03■□□□□ 0.32
MKS1-202ENST00000393119 REXO1Q8N1G1 1221 aaKnown RBP17.03■□□□□ 0.32
MKS1-202ENST00000393119 ZNF830Q96NB3 372 aaPredicted RBP17.03■□□□□ 0.32
MKS1-202ENST00000393119 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 FBXO28Q9NVF7 368 aa17.03■□□□□ 0.32
MKS1-202ENST00000393119 PHF20L1A8MW92 1017 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 TDP2O95551 362 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 TNNI2P48788 182 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 ADCY7P51828 1080 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 MTMR8Q96EF0 704 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 PCDHA1Q9Y5I3 950 aa17.02■□□□□ 0.32
MKS1-202ENST00000393119 BMP3P12645 472 aa17.02■□□□□ 0.31
MKS1-202ENST00000393119 GNA11P29992 359 aa17.02■□□□□ 0.31
MKS1-202ENST00000393119 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.31
MKS1-202ENST00000393119 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.31
MKS1-202ENST00000393119 ANGEL2Q5VTE6 544 aaKnown RBP17.02■□□□□ 0.31
MKS1-202ENST00000393119 POTEDQ86YR6 584 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms