RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 NUP88Q99567 741 aaPredicted RBP15.7■□□□□ 0.1
PTN-202ENST00000393083 SLC26A6Q9BXS9 759 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 GCLCP48506 637 aaPredicted RBP15.69■□□□□ 0.1
PTN-202ENST00000393083 CAP1Q01518 475 aa15.69■□□□□ 0.1
PTN-202ENST00000393083 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
PTN-202ENST00000393083 SLFN13Q68D06 897 aa15.69■□□□□ 0.1
PTN-202ENST00000393083 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
PTN-202ENST00000393083 TRIM22Q8IYM9 498 aa15.69■□□□□ 0.1
PTN-202ENST00000393083 C8orf76Q96K31 380 aa15.69■□□□□ 0.1
PTN-202ENST00000393083 TANGO6Q9C0B7 1094 aa15.69■□□□□ 0.1
PTN-202ENST00000393083 SPDYE16A6NNV3 312 aaPredicted RBP15.68■□□□□ 0.1
PTN-202ENST00000393083 RAD21O60216 631 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 GUCY1B3Q02153 619 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 RESTQ13127 1097 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 COG2Q14746 738 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 GMCL1Q96IK5 515 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 ALG1Q9BT22 464 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 TXNRD2Q9NNW7 524 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 RBPJLQ9UBG7 517 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 MORF4L1Q9UBU8 362 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 RLFQ13129 1914 aa15.68■□□□□ 0.1
PTN-202ENST00000393083 BAZ2BQ9UIF8 2168 aaKnown RBP15.67■□□□□ 0.1
PTN-202ENST00000393083 CASP8AP2Q9UKL3 1982 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 PEX10O60683 326 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 PLEKHA8P1O95397 391 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 DSG3P32926 999 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 TMTC3Q6ZXV5 915 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 RASGRP2Q7LDG7 609 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 NBPF11Q86T75 865 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 CMTR1Q8N1G2 835 aaKnown RBP15.67■□□□□ 0.1
PTN-202ENST00000393083 ANKRD13CQ8N6S4 541 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 WASF1Q92558 559 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 FBXO28Q9NVF7 368 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 HOXC10Q9NYD6 342 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 MYPNQ86TC9 1320 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 CNTNAP5Q8WYK1 1306 aa15.67■□□□□ 0.1
PTN-202ENST00000393083 CNMDO75829 334 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 FLOT1O75955 427 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 KIF5BP33176 963 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 LACTBP83111 547 aaPredicted RBP15.66■□□□□ 0.1
PTN-202ENST00000393083 GRM4Q14833 912 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 FAM110CQ1W6H9 321 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 CCDC82Q8N4S0 544 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 GTF3C2Q8WUA4 911 aaPredicted RBP15.66■□□□□ 0.1
PTN-202ENST00000393083 AIFM3Q96NN9 605 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 MAP3K14Q99558 947 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 RNF26Q9BY78 433 aaPredicted RBP15.66■□□□□ 0.1
PTN-202ENST00000393083 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 DEXIO95424 95 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 SNHG28P0DPA3 235 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 BMP3P12645 472 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 NCLP19338 710 aaKnown RBP15.66■□□□□ 0.1
PTN-202ENST00000393083 CTGFP29279 349 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 CD99L2Q8TCZ2 262 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 ERO1AQ96HE7 468 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 ZSCAN16Q9H4T2 348 aaPredicted RBP15.66■□□□□ 0.1
PTN-202ENST00000393083 PPP1R9AQ9ULJ8 1098 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 MTMR7Q9Y216 660 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 CNPY2Q9Y2B0 182 aa15.66■□□□□ 0.1
PTN-202ENST00000393083 PDHBP11177 359 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 SLC1A4P43007 532 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 AKAP17AQ02040 695 aaKnown RBP15.65■□□□□ 0.1
PTN-202ENST00000393083 DNM1Q05193 864 aaKnown RBP15.65■□□□□ 0.1
PTN-202ENST00000393083 TRIM29Q14134 588 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 Q3C1V9 767 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 RGS22Q8NE09 1264 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 DCAF4Q8WV16 495 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 ATG4CQ96DT6 458 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 ARHGAP39Q9C0H5 1083 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 LMBRD1Q9NUN5 540 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 BTBD7Q9P203 1132 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 FEM1BQ9UK73 627 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 RABGAP1Q9Y3P9 1069 aa15.65■□□□□ 0.1
PTN-202ENST00000393083 TRAK2O60296 914 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 PLA2G6O60733 806 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 PRPF40AO75400 957 aaKnown RBP15.64■□□□□ 0.09
PTN-202ENST00000393083 ERVK-9P63128 1117 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 ERVK-24P63145 666 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 FUT2Q10981 343 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 COL13A1Q5TAT6 717 aaPredicted RBP15.64■□□□□ 0.09
PTN-202ENST00000393083 FAM173BQ6P4H8 233 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 KCTD1Q719H9 257 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 GPRC5AQ8NFJ5 357 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 SLF1Q9BQI6 1058 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 GDPD2Q9HCC8 539 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 GJB4Q9NTQ9 266 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 PARP14Q460N5 1801 aa15.64■□□□□ 0.09
PTN-202ENST00000393083 TMEM232C9JQI7 657 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 PRPF3O43395 683 aaKnown RBP15.63■□□□□ 0.09
PTN-202ENST00000393083 FIBPO43427 364 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 GNAQP50148 359 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 KRT85P78386 507 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 KRT40Q6A162 431 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 SRBD1Q8N5C6 995 aaKnown RBP15.63■□□□□ 0.09
PTN-202ENST00000393083 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 PRPF38AQ8NAV1 312 aaKnown RBP15.63■□□□□ 0.09
PTN-202ENST00000393083 TRIM47Q96LD4 638 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 PAGR1Q9BTK6 254 aa15.63■□□□□ 0.09
PTN-202ENST00000393083 A0A0G2JMZ2 1700 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms