RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 CCDC121Q6ZUS5 278 aa13.97□□□□□ -0.17
CLTC-202ENST00000393043 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
CLTC-202ENST00000393043 COMMD10Q9Y6G5 202 aa13.97□□□□□ -0.17
CLTC-202ENST00000393043 SOS2Q07890 1332 aaPredicted RBP13.97□□□□□ -0.17
CLTC-202ENST00000393043 DIP2CQ9Y2E4 1556 aa13.97□□□□□ -0.17
CLTC-202ENST00000393043 H0YCG3 227 aa13.97□□□□□ -0.17
CLTC-202ENST00000393043 COPB1P53618 953 aaKnown RBP13.97□□□□□ -0.17
CLTC-202ENST00000393043 LARSQ9P2J5 1176 aaKnown RBP13.97□□□□□ -0.17
CLTC-202ENST00000393043 SERPINB13Q9UIV8 391 aa13.97□□□□□ -0.17
CLTC-202ENST00000393043 TMEM232C9JQI7 657 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 EEF1GP26641 437 aaKnown RBP13.96□□□□□ -0.17
CLTC-202ENST00000393043 HLFQ16534 295 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 ZNF365Q70YC5 407 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 TEKT3Q9BXF9 490 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 QTRT2Q9H974 415 aaKnown RBP13.96□□□□□ -0.17
CLTC-202ENST00000393043 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 BRD3Q15059 726 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 GBP6Q6ZN66 633 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 KIAA1524Q8TCG1 905 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 UIMC1Q96RL1 719 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 ISCA1Q9BUE6 129 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 DHX36Q9H2U1 1008 aaKnown RBP13.96□□□□□ -0.17
CLTC-202ENST00000393043 SRPRBQ9Y5M8 271 aaKnown RBP13.96□□□□□ -0.17
CLTC-202ENST00000393043 LRRIQ1Q96JM4 1722 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 CRB1P82279 1406 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 RPS6KA4O75676 772 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 FERP16591 822 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 DPCR1Q3MIW9 517 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 MSL1Q68DK7 614 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 STAG1Q8WVM7 1258 aa13.96□□□□□ -0.17
CLTC-202ENST00000393043 ERCC3P19447 782 aa13.96□□□□□ -0.18
CLTC-202ENST00000393043 TOB2Q14106 344 aaPredicted RBP13.96□□□□□ -0.18
CLTC-202ENST00000393043 RUFY4Q6ZNE9 571 aa13.96□□□□□ -0.18
CLTC-202ENST00000393043 AGTPBP1Q9UPW5 1226 aa13.96□□□□□ -0.18
CLTC-202ENST00000393043 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.18
CLTC-202ENST00000393043 PLA2G4DQ86XP0 818 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 DGKHQ86XP1 1220 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 OTUD6BQ8N6M0 293 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 MAIP1Q8WWC4 291 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.95□□□□□ -0.18
CLTC-202ENST00000393043 TCP10L2B9ZVM9 353 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 IRX3P78415 501 aaPredicted RBP13.95□□□□□ -0.18
CLTC-202ENST00000393043 MECOMQ03112 1051 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 TRIM28Q13263 835 aaKnown RBP13.95□□□□□ -0.18
CLTC-202ENST00000393043 FAM178BQ8IXR5 827 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
CLTC-202ENST00000393043 SLC39A2Q9NP94 309 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 SMIM23A6NLE4 172 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 ATP2C2O75185 946 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 GABPB1Q06547 395 aaPredicted RBP13.95□□□□□ -0.18
CLTC-202ENST00000393043 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
CLTC-202ENST00000393043 ALDH8A1Q9H2A2 487 aaPredicted RBP13.95□□□□□ -0.18
CLTC-202ENST00000393043 SAMD15Q9P1V8 674 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 KIAA1210Q9ULL0 1709 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 ALAS1P13196 640 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 RCAN1P53805 252 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 TXNDC16Q9P2K2 825 aa13.95□□□□□ -0.18
CLTC-202ENST00000393043 CCDC14Q49A88 953 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 ENOX1Q8TC92 643 aaKnown RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 FBF1Q8TES7 1133 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 BCL2L12Q9HB09 334 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 EFCAB8A8MWE9 144 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 RNASE9P60153 205 aaKnown RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 PPP2R5EQ16537 467 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 C11orf57Q6ZUT1 292 aaPredicted RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 RETREG2Q8NC44 543 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 DESI2Q9BSY9 194 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 HYOU1Q9Y4L1 999 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 STK36Q9NRP7 1315 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 NDC80O14777 642 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 NR5A1Q13285 461 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 ADAM9Q13443 819 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 ZNF658Q5TYW1 1059 aaPredicted RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 KCNK9Q9NPC2 374 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 AMFRQ9UKV5 643 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 EPN1Q9Y6I3 576 aaPredicted RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 GOLGA6BA6NDN3 693 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 YWHAEP62258 255 aaKnown RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 MTMR3Q13615 1198 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
CLTC-202ENST00000393043 SMAP1Q8IYB5 467 aaPredicted RBP13.94□□□□□ -0.18
CLTC-202ENST00000393043 FTOQ9C0B1 505 aaKnown RBP eCLIP13.94□□□□□ -0.18
CLTC-202ENST00000393043 TCP1P17987 556 aaKnown RBP13.93□□□□□ -0.18
CLTC-202ENST00000393043 TUBGCP2Q9BSJ2 902 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 CSADQ9Y600 493 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
CLTC-202ENST00000393043 GOLGA6CA6NDK9 693 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 GOLGA6DP0CG33 693 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 GOLGA6AQ9NYA3 693 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 FEZ2Q9UHY8 353 aaPredicted RBP13.93□□□□□ -0.18
CLTC-202ENST00000393043 OVOS2A0A0J9YW53 1432 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 OVOS2Q6IE36 1432 aa13.93□□□□□ -0.18
CLTC-202ENST00000393043 CYP2E1P05181 493 aaPredicted RBP13.93□□□□□ -0.18
CLTC-202ENST00000393043 CYP2J2P51589 502 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms