RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 EVI5O60447 810 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ERVK-24P63145 666 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 LRMPQ12912 555 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 PLA2G4DQ86XP0 818 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 FAM200AQ8TCP9 573 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ARGLU1Q9NWB6 273 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 CCDC189A1A4V9 331 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 POLR3DP05423 398 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 CCDC192P0DO97 292 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 CDC25BP30305 580 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 TDO2P48775 406 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 PLEKHH3Q7Z736 793 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 FILIP1Q7Z7B0 1213 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 CDK5RAP2Q96SN8 1893 aa13.05□□□□□ -0.32
TRAF3IP2-208ENST00000392556 PDE6AP16499 860 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ACTN2P35609 894 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 JAG1P78504 1218 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 SLC9C2Q5TAH2 1124 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 USP6NLQ92738 828 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 APBA2Q99767 749 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 GABPAQ06546 454 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 TMCO3Q6UWJ1 677 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 OGDHLQ9ULD0 1010 aa13.04□□□□□ -0.32
TRAF3IP2-208ENST00000392556 TUBB4AP04350 444 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ZNF75DP51815 510 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 MORN1Q5T089 497 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 TTC22Q5TAA0 569 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 CASC1Q6TDU7 716 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 MMS22LQ6ZRQ5 1243 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 GPR142Q7Z601 462 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 PRO3102Q9H379 93 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 SH2D4AQ9H788 454 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 TXNRD2Q9NNW7 524 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 MYH1P12882 1939 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 SLC15A5A6NIM6 579 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 POLR3GO15318 223 aaPredicted RBP13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 SHMT1P34896 483 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 SART3Q15020 963 aaKnown RBP13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 TRIB2Q92519 343 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 ATP8A2Q9NTI2 1148 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
TRAF3IP2-208ENST00000392556 MSCO60682 206 aa13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ATP5JP18859 108 aa13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CYP2B6P20813 491 aa13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CACTINQ8WUQ7 758 aaKnown RBP13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MCM9Q9NXL9 1143 aa13.02□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PPP1R12AO14974 1030 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TPM1P09493 284 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 HOXC6P09630 235 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 VCAM1P19320 739 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 BMP8BP34820 402 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CORO7P57737 925 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MFSD14CQ5VZR4 134 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GIMAP6Q6P9H5 292 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TMEM179Q6ZVK1 233 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 MB21D1Q8N884 522 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 LPAR1Q92633 364 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 C11orf49Q9H6J7 331 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 GOLIM4O00461 696 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 CALRP27797 417 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PAGR1Q9BTK6 254 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PAG1Q9NWQ8 432 aa13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP2-208ENST00000392556 STRNO43815 780 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 OAS2P29728 719 aaKnown RBP13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 PLCD1P51178 756 aa13□□□□□ -0.33
TRAF3IP2-208ENST00000392556 COG2Q14746 738 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms