RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 LSG1Q9H089 658 aaKnown RBP14.85□□□□□ -0.03
GGPS1-203ENST00000391855 RANBP17Q9H2T7 1088 aaKnown RBP14.85□□□□□ -0.03
GGPS1-203ENST00000391855 ACAD9Q9H845 621 aa14.85□□□□□ -0.03
GGPS1-203ENST00000391855 ANO2Q9NQ90 1003 aa14.85□□□□□ -0.03
GGPS1-203ENST00000391855 ERICH2A1L162 156 aa14.84□□□□□ -0.03
GGPS1-203ENST00000391855 E7EWF7 191 aa14.84□□□□□ -0.03
GGPS1-203ENST00000391855 FARP2O94887 1054 aaPredicted RBP14.84□□□□□ -0.03
GGPS1-203ENST00000391855 IFIT1BQ5T764 474 aaKnown RBP14.84□□□□□ -0.03
GGPS1-203ENST00000391855 RASGRP2Q7LDG7 609 aa14.84□□□□□ -0.03
GGPS1-203ENST00000391855 MSL3Q8N5Y2 521 aaKnown RBP14.84□□□□□ -0.03
GGPS1-203ENST00000391855 DDX11Q96FC9 970 aa14.84□□□□□ -0.03
GGPS1-203ENST00000391855 MTA3Q9BTC8 594 aa14.84□□□□□ -0.03
GGPS1-203ENST00000391855 FLRT1Q9NZU1 646 aa14.84□□□□□ -0.03
GGPS1-203ENST00000391855 RIPK3Q9Y572 518 aa14.84□□□□□ -0.03
GGPS1-203ENST00000391855 TFRCP02786 760 aaKnown RBP14.83□□□□□ -0.03
GGPS1-203ENST00000391855 ICAM1P05362 532 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 SEC23AQ15436 765 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 ZNF792Q3KQV3 632 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 RNF20Q5VTR2 975 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 SKAP1Q86WV1 359 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 ANKRD35Q8N283 1001 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 GPCPD1Q9NPB8 672 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 RNF146Q9NTX7 359 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 OGDHLQ9ULD0 1010 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 ZNF536O15090 1300 aa14.83□□□□□ -0.03
GGPS1-203ENST00000391855 FRMPD2Q68DX3 1309 aaPredicted RBP14.83□□□□□ -0.03
GGPS1-203ENST00000391855 PFASO15067 1338 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 WDR19Q8NEZ3 1342 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 CYBAP13498 195 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 CYP2C19P33261 490 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 SLC4A3P48751 1232 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 TTBK2Q6IQ55 1244 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
GGPS1-203ENST00000391855 CHMP4CQ96CF2 233 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 CCPG1Q9ULG6 757 aa14.83□□□□□ -0.04
GGPS1-203ENST00000391855 ZNFX1Q9P2E3 1918 aaKnown RBP14.82□□□□□ -0.04
GGPS1-203ENST00000391855 PLXNA1Q9UIW2 1896 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 IFIT3O14879 490 aaKnown RBP14.82□□□□□ -0.04
GGPS1-203ENST00000391855 PGK2P07205 417 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
GGPS1-203ENST00000391855 CCND3P30281 292 aaPredicted RBP14.82□□□□□ -0.04
GGPS1-203ENST00000391855 CCDC174Q6PII3 467 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 CYB5R4Q7L1T6 521 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 UBE2Q1Q7Z7E8 422 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 AGBL1Q96MI9 1066 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 TINF2Q9BSI4 451 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 HTATIP2Q9BUP3 242 aa14.82□□□□□ -0.04
GGPS1-203ENST00000391855 DDX20Q9UHI6 824 aaKnown RBP14.82□□□□□ -0.04
GGPS1-203ENST00000391855 SLC27A2O14975 620 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 ALAS1P13196 640 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 SLC16A2P36021 539 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 WTAPQ15007 396 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 NECTIN1Q15223 517 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 CREB3L3Q68CJ9 461 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 MAMDC4Q6UXC1 1216 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 STOX1Q6ZVD7 989 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 MB21D2Q8IYB1 491 aaPredicted RBP14.81□□□□□ -0.04
GGPS1-203ENST00000391855 TRERF1Q96PN7 1200 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 MAF1Q9H063 256 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 HOMER2Q9NSB8 354 aa14.81□□□□□ -0.04
GGPS1-203ENST00000391855 POTEB2H3BUK9 544 aa14.8□□□□□ -0.04
GGPS1-203ENST00000391855 SEPT4O43236 478 aa14.8□□□□□ -0.04
GGPS1-203ENST00000391855 PRPF38BQ5VTL8 546 aaKnown RBP14.8□□□□□ -0.04
GGPS1-203ENST00000391855 LHX8Q68G74 356 aa14.8□□□□□ -0.04
GGPS1-203ENST00000391855 NECAB2Q7Z6G3 386 aa14.8□□□□□ -0.04
GGPS1-203ENST00000391855 A1CFQ9NQ94 594 aaKnown RBP14.8□□□□□ -0.04
GGPS1-203ENST00000391855 CNPY2Q9Y2B0 182 aa14.8□□□□□ -0.04
GGPS1-203ENST00000391855 TAF6LQ9Y6J9 622 aa14.8□□□□□ -0.04
GGPS1-203ENST00000391855 FRMPD3Q5JV73 1810 aa14.8□□□□□ -0.04
GGPS1-203ENST00000391855 GOLGA8HP0CJ92 632 aa14.79□□□□□ -0.04
GGPS1-203ENST00000391855 CNGA1P29973 690 aa14.79□□□□□ -0.04
GGPS1-203ENST00000391855 MCM5P33992 734 aa14.79□□□□□ -0.04
GGPS1-203ENST00000391855 TMEM67Q5HYA8 995 aa14.79□□□□□ -0.04
GGPS1-203ENST00000391855 FAM133AQ8N9E0 248 aa14.79□□□□□ -0.04
GGPS1-203ENST00000391855 TMEM87BQ96K49 555 aa14.79□□□□□ -0.04
GGPS1-203ENST00000391855 LOC102724159A0A0B4J2E5 919 aa14.78□□□□□ -0.04
GGPS1-203ENST00000391855 SNAP25P60880 206 aa14.78□□□□□ -0.04
GGPS1-203ENST00000391855 KRT32Q14532 448 aa14.78□□□□□ -0.04
GGPS1-203ENST00000391855 PWP2Q15269 919 aaKnown RBP14.78□□□□□ -0.04
GGPS1-203ENST00000391855 CATIPQ7Z7H3 387 aa14.78□□□□□ -0.04
GGPS1-203ENST00000391855 TMTC2Q8N394 836 aa14.78□□□□□ -0.04
GGPS1-203ENST00000391855 TRPV1Q8NER1 839 aa14.78□□□□□ -0.04
GGPS1-203ENST00000391855 CENPFP49454 3210 aa14.78□□□□□ -0.04
GGPS1-203ENST00000391855 ASB14A6NK59 587 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 EPB41L2O43491 1005 aaKnown RBP14.77□□□□□ -0.04
GGPS1-203ENST00000391855 PRC1O43663 620 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 DHX16O60231 1041 aaKnown RBP14.77□□□□□ -0.04
GGPS1-203ENST00000391855 REC8O95072 547 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 AKR1A1P14550 325 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 ANTXR2P58335 489 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 TRAF1Q13077 416 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 GRM4Q14833 912 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 CDC37Q16543 378 aaPredicted RBP14.77□□□□□ -0.04
GGPS1-203ENST00000391855 PAWRQ96IZ0 340 aaKnown RBP14.77□□□□□ -0.04
GGPS1-203ENST00000391855 MAP3K14Q99558 947 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 UBA5Q9GZZ9 404 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 CYP39A1Q9NYL5 469 aa14.77□□□□□ -0.04
GGPS1-203ENST00000391855 ABCB11O95342 1321 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms