RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 CAPS2Q9BXY5 557 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 DPH5Q9H2P9 285 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 SENP2Q9HC62 589 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 RRP15Q9Y3B9 282 aaKnown RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 SALL3Q9BXA9 1300 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 LOC102724428A0A0B4J2F2 783 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 NMT2O60551 498 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 CRKLP46109 303 aaKnown RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 SIK1P57059 783 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 GTF2IP78347 998 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 VWA3BQ502W6 1294 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 U2AF1L4Q8WU68 220 aaKnown RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 ALDH8A1Q9H2A2 487 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 MRPL44Q9H9J2 332 aaKnown RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 LY9Q9HBG7 655 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 CTTNBP2NLQ9P2B4 639 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 TMEM94Q12767 1356 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 ATP8B1O43520 1251 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 EZRP15311 586 aaKnown RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 ZSCAN20P17040 1043 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 TCP1P17987 556 aaKnown RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 ZNF658Q5TYW1 1059 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 SUSD4Q5VX71 490 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 GBP6Q6ZN66 633 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 PNMA8AQ86V59 439 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-202ENST00000391611 MYCT1Q8N699 235 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 LRRC45Q96CN5 670 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 MED4Q9NPJ6 270 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 GGA1Q9UJY5 639 aa14.35□□□□□ -0.11
PCNX4-202ENST00000391611 MYO3AQ8NEV4 1616 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 FAM205CA6NFA0 338 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 DDAH1O94760 285 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 LLGL1Q15334 1064 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 FBF1Q8TES7 1133 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 PANX2Q96RD6 677 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 SAMD15Q9P1V8 674 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 UTP11Q9Y3A2 253 aaKnown RBP14.34□□□□□ -0.11
PCNX4-202ENST00000391611 CAPN7Q9Y6W3 813 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 USP17L3A6NCW0 530 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 USP17L4A6NCW7 530 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 CYP4A11Q02928 519 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 USP17L1Q7RTZ2 530 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 CCDC91Q7Z6B0 441 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 KSR1Q8IVT5 923 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 FNBP4Q8N3X1 1017 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-202ENST00000391611 NSRP1Q9H0G5 558 aaKnown RBP14.34□□□□□ -0.11
PCNX4-202ENST00000391611 FLOT1O75955 427 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 CFBP00751 764 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 DIXDC1Q155Q3 683 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 ZRSR2Q15696 482 aaKnown RBP14.34□□□□□ -0.11
PCNX4-202ENST00000391611 FAM26FQ5R3K3 315 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 USP17L2Q6R6M4 530 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 P2RX5Q93086 422 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 FAM212AQ96EL1 285 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 CCDC77Q9BR77 488 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 FUCA2Q9BTY2 467 aa14.34□□□□□ -0.11
PCNX4-202ENST00000391611 ZBTB22O15209 634 aa14.33□□□□□ -0.11
PCNX4-202ENST00000391611 CYP2D6P10635 497 aa14.33□□□□□ -0.11
PCNX4-202ENST00000391611 CTNNA1P35221 906 aaKnown RBP14.33□□□□□ -0.11
PCNX4-202ENST00000391611 HAUS3Q68CZ6 603 aa14.33□□□□□ -0.11
PCNX4-202ENST00000391611 KRT12Q99456 494 aa14.33□□□□□ -0.11
PCNX4-202ENST00000391611 EXOC3O60645 756 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 MOCS3O95396 460 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 CARD10Q9BWT7 1032 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 MYO1AQ9UBC5 1043 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 ADGRG1Q9Y653 693 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
PCNX4-202ENST00000391611 UBE2Q2LH0YL09 131 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
PCNX4-202ENST00000391611 ADAM9Q13443 819 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 RABL6Q3YEC7 729 aaPredicted RBP14.33□□□□□ -0.12
PCNX4-202ENST00000391611 PPP4R3AQ6IN85 833 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 TPH2Q8IWU9 490 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 ANKRD7Q92527 254 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 ARMCX3Q9UH62 379 aaPredicted RBP14.33□□□□□ -0.12
PCNX4-202ENST00000391611 MTUS1Q9ULD2 1270 aa14.33□□□□□ -0.12
PCNX4-202ENST00000391611 PRPF3O43395 683 aaKnown RBP14.32□□□□□ -0.12
PCNX4-202ENST00000391611 FTCDO95954 541 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 IL6STP40189 918 aaPredicted RBP14.32□□□□□ -0.12
PCNX4-202ENST00000391611 PRR16Q569H4 304 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 TCP11X2Q5H9J9 407 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 GSPT2Q8IYD1 628 aaKnown RBP14.32□□□□□ -0.12
PCNX4-202ENST00000391611 EPB41L5Q9HCM4 733 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 HDAC6Q9UBN7 1215 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 USP31Q70CQ4 1352 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 WDR17Q8IZU2 1322 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 PP2D1A8MPX8 630 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 KRIT1O00522 736 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 EEF1GP26641 437 aaKnown RBP14.32□□□□□ -0.12
PCNX4-202ENST00000391611 CALRP27797 417 aaKnown RBP14.32□□□□□ -0.12
PCNX4-202ENST00000391611 EIF4A3P38919 411 aaKnown RBP14.32□□□□□ -0.12
PCNX4-202ENST00000391611 RUFY4Q6ZNE9 571 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 TBCKQ8TEA7 893 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 COA7Q96BR5 231 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 PANK4Q9NVE7 773 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 RWDD2AQ9UIY3 292 aa14.32□□□□□ -0.12
PCNX4-202ENST00000391611 KRT5P13647 590 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms