RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 TBC1D16Q8TBP0 767 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 PIBF1Q8WXW3 757 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 EAF2Q96CJ1 260 aaPredicted RBP8.78□□□□□ -1
TRBV28-201ENST00000390400 GPATCH3Q96I76 525 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 EYA3Q99504 573 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 TGIF2Q9GZN2 237 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 CCDC8Q9H0W5 538 aaPredicted RBP8.78□□□□□ -1
TRBV28-201ENST00000390400 NPHS2Q9NP85 383 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 SPTLC3Q9NUV7 552 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 POLLQ9UGP5 575 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 SNED1Q8TER0 1413 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 DUOX1Q9NRD9 1551 aa8.78□□□□□ -1
TRBV28-201ENST00000390400 FER1L6Q2WGJ9 1857 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 EREGO14944 169 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 ADORA1P30542 326 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 CHAF1AQ13111 956 aaPredicted RBP8.77□□□□□ -1.01
TRBV28-201ENST00000390400 C15orf52Q6ZUT6 534 aaKnown RBP8.77□□□□□ -1.01
TRBV28-201ENST00000390400 ZNF438Q7Z4V0 828 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 CRELD1Q96HD1 420 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 PSMD1Q99460 953 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 DBNDD2Q9BQY9 259 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 RTFDC1Q9BY42 306 aaPredicted RBP8.77□□□□□ -1.01
TRBV28-201ENST00000390400 TAOK3Q9H2K8 898 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 RUBCNLQ9H714 662 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 C12orf49Q9H741 205 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
TRBV28-201ENST00000390400 TIMMDC1Q9NPL8 285 aa8.77□□□□□ -1.01
TRBV28-201ENST00000390400 TLR7Q9NYK1 1049 aaKnown RBP8.77□□□□□ -1.01
TRBV28-201ENST00000390400 DBNLQ9UJU6 430 aaKnown RBP8.77□□□□□ -1.01
TRBV28-201ENST00000390400 MED23Q9ULK4 1368 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 WTIPA6NIX2 430 aaPredicted RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 MX1P20591 662 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 EIF4BP23588 611 aaKnown RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 KLRK1P26718 216 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 ZSCAN23Q3MJ62 389 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 CAVIN4Q5BKX8 364 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 ARSJQ5FYB0 599 aaPredicted RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 CCDC158Q5M9N0 1113 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 NXPE4Q6UWF7 544 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 VPS37DQ86XT2 251 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 C16orf71Q8IYS4 520 aaPredicted RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 OTUD7AQ8TE49 926 aaPredicted RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 GPR101Q96P66 508 aaPredicted RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 ZC3H12CQ9C0D7 883 aaKnown RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 GPAMQ9HCL2 828 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 GNL3LQ9NVN8 582 aaKnown RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 DDX41Q9UJV9 622 aaKnown RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 GPC6Q9Y625 555 aaPredicted RBP8.76□□□□□ -1.01
TRBV28-201ENST00000390400 LTBP3Q9NS15 1303 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 IRS2Q9Y4H2 1338 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 CHD4Q14839 1912 aa8.76□□□□□ -1.01
TRBV28-201ENST00000390400 NFKBIEO00221 500 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 ERC2O15083 957 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 PPIP5K2O43314 1243 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 UQCRFS1P1P0C7P4 283 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 YBX3P16989 372 aaKnown RBP eCLIP8.75□□□□□ -1.01
TRBV28-201ENST00000390400 HIBADHP31937 336 aaKnown RBP8.75□□□□□ -1.01
TRBV28-201ENST00000390400 GYG1P46976 350 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 GPR162Q16538 588 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 HIF1AQ16665 826 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 WDR44Q5JSH3 913 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 TTC39AQ5SRH9 613 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 PDE12Q6L8Q7 609 aaKnown RBP8.75□□□□□ -1.01
TRBV28-201ENST00000390400 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 ZNF804AQ7Z570 1209 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 SNX29Q8TEQ0 813 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 IPO4Q8TEX9 1081 aaKnown RBP8.75□□□□□ -1.01
TRBV28-201ENST00000390400 CAPN10Q9HC96 672 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 ZNF277Q9NRM2 450 aaPredicted RBP8.75□□□□□ -1.01
TRBV28-201ENST00000390400 ECHDC1Q9NTX5 307 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 USP25Q9UHP3 1055 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 MYH13Q9UKX3 1938 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 SRCAPQ6ZRS2 3230 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 AOX1Q06278 1338 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 TTC41PQ6P2S7 1318 aa8.75□□□□□ -1.01
TRBV28-201ENST00000390400 A0A1B0GTH6 734 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 PHACTR2O75167 634 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 RPLP1P05386 114 aaKnown RBP8.74□□□□□ -1.01
TRBV28-201ENST00000390400 PHKA1P46020 1223 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 PDE1AP54750 535 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 AOC3Q16853 763 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 TSHZ3Q63HK5 1081 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 CAVIN1Q6NZI2 390 aaKnown RBP8.74□□□□□ -1.01
TRBV28-201ENST00000390400 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 FAM84BQ96KN1 310 aaPredicted RBP8.74□□□□□ -1.01
TRBV28-201ENST00000390400 CEP63Q96MT8 703 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 FRMD6Q96NE9 622 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 COA1Q9GZY4 146 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 VPS33BQ9H267 617 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 LATS2Q9NRM7 1088 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 LMBRD1Q9NUN5 540 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 OGFRQ9NZT2 677 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 STAP2Q9UGK3 403 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 CCDC88AQ3V6T2 1871 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 SALL3Q9BXA9 1300 aa8.74□□□□□ -1.01
TRBV28-201ENST00000390400 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 GRIN3BO60391 1043 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 XYLBO75191 536 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms