RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 TOMM22Q9NS69 142 aa16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 PHF24Q9UPV7 400 aa16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 ASB14A6NK59 587 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 ZNF213O14771 459 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 DUSP11O75319 330 aaKnown RBP16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 BTNL9Q6UXG8 535 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 NUP133Q8WUM0 1156 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 SPC25Q9HBM1 224 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 ISY1Q9ULR0 285 aaKnown RBP16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 TRIOBPQ9H2D6 2365 aa16.04■□□□□ 0.16
TRBV4-1-201ENST00000390357 MOXD2PA6NHM9 499 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 SNAI1O95863 264 aaPredicted RBP16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 ATN1P54259 1190 aaPredicted RBP16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 RTP1P59025 263 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 ACVR2BQ13705 512 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 ANO1Q5XXA6 986 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 PCSK9Q8NBP7 692 aaKnown RBP16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 ESR2Q92731 530 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 DIAPH3Q9NSV4 1193 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 PRR12Q9ULL5 1215 aa16.03■□□□□ 0.16
TRBV4-1-201ENST00000390357 ZNF536O15090 1300 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 LOC102724159A0A0B4J2E5 919 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 PWP2Q15269 919 aaKnown RBP16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 KCTD1Q719H9 257 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 DGKHQ86XP1 1220 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 TMEM47Q9BQJ4 181 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 CTNNA3Q9UI47 895 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
TRBV4-1-201ENST00000390357 NMT2O60551 498 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 ICAM1P05362 532 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 TAL1P17542 331 aaPredicted RBP16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 ZNF589Q86UQ0 364 aaPredicted RBP16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 FAM133AQ8N9E0 248 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 KLHDC9Q8NEP7 349 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 TOX2Q96NM4 488 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 DSCC1Q9BVC3 393 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 MAF1Q9H063 256 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 RANBP17Q9H2T7 1088 aaKnown RBP16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 RNF146Q9NTX7 359 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 ATP11BQ9Y2G3 1177 aa16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
TRBV4-1-201ENST00000390357 ADAMTS4O75173 837 aa16■□□□□ 0.15
TRBV4-1-201ENST00000390357 PGK1P00558 417 aa16■□□□□ 0.15
TRBV4-1-201ENST00000390357 ALAS1P13196 640 aa16■□□□□ 0.15
TRBV4-1-201ENST00000390357 CST5P28325 142 aaPredicted RBP16■□□□□ 0.15
TRBV4-1-201ENST00000390357 NKX3-2P78367 333 aa16■□□□□ 0.15
TRBV4-1-201ENST00000390357 CCDC96Q2M329 555 aa16■□□□□ 0.15
TRBV4-1-201ENST00000390357 CWC27Q6UX04 472 aaKnown RBP16■□□□□ 0.15
TRBV4-1-201ENST00000390357 ARMCX2Q7L311 632 aa16■□□□□ 0.15
TRBV4-1-201ENST00000390357 A1CFQ9NQ94 594 aaKnown RBP16■□□□□ 0.15
TRBV4-1-201ENST00000390357 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
TRBV4-1-201ENST00000390357 ELP1O95163 1332 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 ACLYP53396 1101 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 GJA9P57773 515 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 CCDC144BQ3MJ40 725 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 GPATCH4Q5T3I0 446 aaKnown RBP15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 IQSEC1Q6DN90 963 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 CCDC144CPQ8IYA2 1237 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 SEZ6LQ9BYH1 1024 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 HOMER2Q9NSB8 354 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 ADD3Q9UEY8 706 aaKnown RBP15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 CCPG1Q9ULG6 757 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 Q9Y3F1 56 aa15.99■□□□□ 0.15
TRBV4-1-201ENST00000390357 MROH7Q68CQ1 1323 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 A0A1W2PQ45 241 aaPredicted RBP15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 A0A1W2PQY0 241 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 PDHBP11177 359 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 HAND2P61296 217 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 KCNA10Q16322 511 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 IMMTQ16891 758 aaKnown RBP15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 TRIM60Q495X7 471 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 SYDE2Q5VT97 1194 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 CCDC174Q6PII3 467 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 ANKRD33Q7Z3H0 272 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 ANKS1AQ92625 1134 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 GLT1D1Q96MS3 346 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 MPHOSPH6Q99547 160 aaKnown RBP15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 KRT23Q9C075 422 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 UPF3AQ9H1J1 476 aaKnown RBP15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 CNNM2Q9H8M5 875 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 STARD7Q9NQZ5 370 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 CYP39A1Q9NYL5 469 aa15.98■□□□□ 0.15
TRBV4-1-201ENST00000390357 SYNRGQ9UMZ2 1314 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 DCDC2CA8MYV0 355 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 B4DLN1 442 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 SNHG28P0DPA3 235 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 MRPL12P52815 198 aaKnown RBP15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 CNTN2Q02246 1040 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms