RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 NAA25Q14CX7 972 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 GADL1Q6ZQY3 521 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 TRPM1Q7Z4N2 1603 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 PDE6CP51160 858 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 SEPT10Q9P0V9 454 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 PRDM15P57071 1507 aaPredicted RBP13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 RNF169Q8NCN4 708 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 SLC17A8Q8NDX2 589 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 SOS2Q07890 1332 aaPredicted RBP13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 BTDP43251 543 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 CERKLQ49MI3 558 aaPredicted RBP13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 ADPGKQ9BRR6 497 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 PCDHA1Q9Y5I3 950 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
KCNQ3-201ENST00000388996 FAM160B1Q5W0V3 765 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 PFKFB2O60825 505 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 STAT1P42224 750 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 PIK3CAP42336 1068 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 DDX41Q9UJV9 622 aaKnown RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 SAR1BQ9Y6B6 198 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 PER1O15534 1290 aaPredicted RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 ARHGAP25P42331 645 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 ZNF710Q8N1W2 664 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 FANCBQ8NB91 859 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 PRPF31Q8WWY3 499 aaKnown RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 KRIT1O00522 736 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 ARHGEF2Q92974 986 aaKnown RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 ZNF274Q96GC6 653 aaPredicted RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 ABCA8O94911 1581 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 XDHP47989 1333 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 CASQ2O14958 399 aaPredicted RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 RPN1P04843 607 aaKnown RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 SEC16AO15027 2179 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 USP17L12C9JPN9 530 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 USP17L21D6R901 530 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 U2AF2P26368 475 aaKnown RBP eCLIP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 INPP5BP32019 993 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 TRIM58Q8NG06 486 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 MIPOL1Q8TD10 442 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 CCPG1Q9ULG6 757 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 NOC2LQ9Y3T9 749 aaKnown RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 TRIM37O94972 964 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 DLATP10515 647 aaKnown RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 CRKLP46109 303 aaKnown RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 POLGP54098 1239 aaPredicted RBP13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 LMNTD2Q8IXW0 634 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 KDM6BO15054 1643 aa13.51□□□□□ -0.25
KCNQ3-201ENST00000388996 TNKSO95271 1327 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 COL4A3BPQ9Y5P4 624 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 XKR9Q5GH70 373 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 TPRP12270 2363 aaKnown RBP13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 RIOK3O14730 519 aaKnown RBP13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 PHLDB2Q86SQ0 1253 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 TECP42680 631 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 FAM47CQ5HY64 1035 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 FAM173BQ6P4H8 233 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 LONRF2Q1L5Z9 754 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 PCCAP05165 728 aaPredicted RBP13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 MLXIPQ9HAP2 919 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 OATP04181 439 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 DESI2Q9BSY9 194 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 ATP2B4P23634 1241 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 STAMQ92783 540 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 SUGCTQ9HAC7 445 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 NLRC4Q9NPP4 1024 aa13.5□□□□□ -0.25
KCNQ3-201ENST00000388996 PPEF1O14829 653 aaPredicted RBP13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 CTAGE3PQ8IX95 158 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 GRK7Q8WTQ7 553 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 CNKSR1Q969H4 720 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 TMOD1P28289 359 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 KRBA2Q6ZNG9 492 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 MGARPQ8TDB4 240 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 SSH3Q8TE77 659 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 HSPD1P10809 573 aaKnown RBP13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 BAG6P46379 1132 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 CIAO1O76071 339 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 MUM1L1Q5H9M0 696 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 IFNL3Q8IZI9 196 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 ZNF804BA4D1E1 1349 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 ABCB4P21439 1286 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 ANKRD35Q8N283 1001 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 TRIML1Q8N9V2 468 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms