RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 V9GY48 417 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 EMBQ6PCB8 327 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 RIMS2Q9UQ26 1411 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 POC1B-GALNT4F8VUJ3 575 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 GSTA1P08263 222 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 GSTA2P09210 222 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 OTUD7BQ6GQQ9 843 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 TBC1D1Q86TI0 1168 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 MCF2P10911 925 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-202ENST00000383836 CUL1Q13616 776 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 CAPN12Q6ZSI9 719 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 IKBKBO14920 756 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 SCYL1Q96KG9 808 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 EXOC3O60645 756 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 C6orf118Q5T5N4 469 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 CABP7Q86V35 215 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 GFM2Q969S9 779 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 SPAG7O75391 227 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 MSH2P43246 934 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 ARHGAP44Q17R89 818 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 MYCT1Q8N699 235 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 VTI1AQ96AJ9 217 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 KDM3AQ9Y4C1 1321 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 SYF2O95926 243 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 GARSP41250 739 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 MAST1Q9Y2H9 1570 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 ATF7P17544 494 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 PICALMQ13492 652 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 ZNF449Q6P9G9 518 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 ZNF804AQ7Z570 1209 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 RNF34Q969K3 372 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 FMO2Q99518 471 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 LRWD1Q9UFC0 647 aa13.54□□□□□ -0.24
SRGAP3-202ENST00000383836 GABPAQ06546 454 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 MIS12Q9H081 205 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 PGRMC1O00264 195 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 MBD4O95243 580 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 SEPT10Q9P0V9 454 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 STOML1Q9UBI4 398 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 REREQ9P2R6 1566 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 RBL2Q08999 1139 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 PTPROQ16827 1216 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 GDAP1Q8TB36 358 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 SEPT8Q92599 483 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 ARHGEF35A5YM69 484 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 COPB1P53618 953 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 OCA2Q04671 838 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 BSPRYQ5W0U4 402 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 NOSTRINQ8IVI9 506 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 NT5C3AQ9H0P0 336 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 PCDHA7Q9UN72 937 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 SYNMO15061 1565 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 ESRRAP11474 423 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 GRAMD1BQ3KR37 738 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 KLC4Q9NSK0 619 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 CROCCQ5TZA2 2017 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 B4DLN1 442 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 GYS2P54840 703 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 STAMQ92783 540 aa13.53□□□□□ -0.24
SRGAP3-202ENST00000383836 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 ADCY2Q08462 1091 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 KRT81Q14533 505 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 RETREG2Q8NC44 543 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 LZTS2Q9BRK4 669 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 KCNA4P22459 653 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 MAP7D3Q8IWC1 876 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 LMNB1P20700 586 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 CDKL2Q92772 493 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 PBKQ96KB5 322 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 MAD1L1Q9Y6D9 718 aa13.52□□□□□ -0.24
SRGAP3-202ENST00000383836 ARHGEF9O43307 516 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 TNNI3KQ59H18 835 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 FPGT-TNNI3KV9GXZ4 949 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 GRM1Q13255 1194 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 TMED2Q15363 201 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 GPAA1O43292 621 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 APPBP2Q92624 585 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms