RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 RRP36Q96EU6 259 aaKnown RBP17.02■□□□□ 0.32
HCG27-201ENST00000383331 FAM13BQ9NYF5 915 aa17.02■□□□□ 0.32
HCG27-201ENST00000383331 HSPA1AP0DMV8 641 aaKnown RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 HSPA1BP0DMV9 641 aaKnown RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 EEF2P13639 858 aaKnown RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 ATP2C1P98194 919 aaPredicted RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 SEPT2Q15019 361 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 TBC1D10BQ4KMP7 808 aaPredicted RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 KRBA2Q6ZNG9 492 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 APOBEC3FQ8IUX4 373 aaKnown RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 ZMYND12Q9H0C1 365 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 ESPNB1AK53 854 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 EGFRP00533 1210 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 ZNF543Q08ER8 600 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 ZNF174Q15697 407 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 LONRF3Q496Y0 759 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 USP50Q70EL3 339 aaPredicted RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 CCDC12Q8WUD4 166 aaPredicted RBP17.01■□□□□ 0.31
HCG27-201ENST00000383331 DCAF4Q8WV16 495 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 CSRNP2Q9H175 543 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 TUBE1Q9UJT0 475 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
HCG27-201ENST00000383331 GDF11O95390 407 aa17■□□□□ 0.31
HCG27-201ENST00000383331 GH2P01242 217 aa17■□□□□ 0.31
HCG27-201ENST00000383331 COL13A1Q5TAT6 717 aaPredicted RBP17■□□□□ 0.31
HCG27-201ENST00000383331 GMCL1P1Q8NEA9 526 aa17■□□□□ 0.31
HCG27-201ENST00000383331 HOOK2Q96ED9 719 aa17■□□□□ 0.31
HCG27-201ENST00000383331 TEPSINQ96N21 525 aa17■□□□□ 0.31
HCG27-201ENST00000383331 UBA5Q9GZZ9 404 aa17■□□□□ 0.31
HCG27-201ENST00000383331 RRAGDQ9NQL2 400 aaPredicted RBP17■□□□□ 0.31
HCG27-201ENST00000383331 SEC63Q9UGP8 760 aaKnown RBP17■□□□□ 0.31
HCG27-201ENST00000383331 FRMPD2Q68DX3 1309 aaPredicted RBP17■□□□□ 0.31
HCG27-201ENST00000383331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.99■□□□□ 0.31
HCG27-201ENST00000383331 ESYT2A0FGR8 921 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 PTGDRQ13258 359 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 PIGSQ96S52 555 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 ADARB2Q9NS39 739 aaKnown RBP16.99■□□□□ 0.31
HCG27-201ENST00000383331 CCDC39Q9UFE4 941 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 A0A087WWV3 80 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 CAP2P40123 477 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 NAPAP54920 295 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 NLRP12P59046 1061 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
HCG27-201ENST00000383331 ATP2B2Q01814 1243 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 FMR1Q06787 632 aaKnown RBP eCLIP16.99■□□□□ 0.31
HCG27-201ENST00000383331 USP49Q70CQ1 688 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 HOMER1Q86YM7 354 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 CEP57L1Q8IYX8 460 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 ARHGEF10LQ9HCE6 1279 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
HCG27-201ENST00000383331 CCDC194A0A1B0GVG4 234 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 ASNSP08243 561 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 RRP1BQ14684 758 aaKnown RBP16.98■□□□□ 0.31
HCG27-201ENST00000383331 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 C4orf32Q8N8J7 132 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 GMCL1Q96IK5 515 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 BPIFA3Q9BQP9 254 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 NAT10Q9H0A0 1025 aaKnown RBP16.98■□□□□ 0.31
HCG27-201ENST00000383331 DEFB129Q9H1M3 183 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 VAT1LQ9HCJ6 419 aa16.98■□□□□ 0.31
HCG27-201ENST00000383331 ATAD5Q96QE3 1844 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 POLR2DO15514 142 aaKnown RBP16.97■□□□□ 0.31
HCG27-201ENST00000383331 GNA11P29992 359 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 VEGFBP49765 207 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 DPCR1Q3MIW9 517 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 ARL6IP4Q66PJ3 421 aaKnown RBP16.97■□□□□ 0.31
HCG27-201ENST00000383331 SLFN13Q68D06 897 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
HCG27-201ENST00000383331 C6orf50Q9HD87 102 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 GPCPD1Q9NPB8 672 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 PITPNM2Q9BZ72 1349 aa16.97■□□□□ 0.31
HCG27-201ENST00000383331 SMCO2A6NFE2 343 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 ACTN4O43707 911 aaKnown RBP16.96■□□□□ 0.31
HCG27-201ENST00000383331 MCM7P33993 719 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 SLC1A4P43007 532 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 JAG1P78504 1218 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 PNOCQ13519 176 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.31
HCG27-201ENST00000383331 SHROOM1Q2M3G4 852 aaPredicted RBP16.96■□□□□ 0.31
HCG27-201ENST00000383331 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 CDAN1Q8IWY9 1227 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 MTMR8Q96EF0 704 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 SH2D4AQ9H788 454 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 JMJD4Q9H9V9 463 aa16.96■□□□□ 0.31
HCG27-201ENST00000383331 HOOK1Q9UJC3 728 aaKnown RBP16.96■□□□□ 0.31
HCG27-201ENST00000383331 ABT1Q9ULW3 272 aaKnown RBP16.96■□□□□ 0.31
HCG27-201ENST00000383331 F5H6K3 240 aa16.96■□□□□ 0.3
HCG27-201ENST00000383331 TRAF5O00463 557 aa16.96■□□□□ 0.3
HCG27-201ENST00000383331 PLCB2Q00722 1185 aa16.96■□□□□ 0.3
HCG27-201ENST00000383331 KLRC3Q07444 240 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms