RNA–Protein interactions for RNA: ENST00000381582.3

GABRB1-202, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 2

Gene GABRB1, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-202ENST00000381582 CCPG1Q9ULG6 757 aa18.03■□□□□ 0.48
GABRB1-202ENST00000381582 RLFQ13129 1914 aa18.03■□□□□ 0.48
GABRB1-202ENST00000381582 FRMPD2Q68DX3 1309 aaPredicted RBP18.02■□□□□ 0.48
GABRB1-202ENST00000381582 RPTORQ8N122 1335 aa18.02■□□□□ 0.48
GABRB1-202ENST00000381582 MSCO60682 206 aa18.02■□□□□ 0.48
GABRB1-202ENST00000381582 CAPN15O75808 1086 aa18.02■□□□□ 0.48
GABRB1-202ENST00000381582 INHAP05111 366 aa18.02■□□□□ 0.48
GABRB1-202ENST00000381582 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
GABRB1-202ENST00000381582 KCNB2Q92953 911 aa18.02■□□□□ 0.48
GABRB1-202ENST00000381582 RNF208Q9H0X6 261 aa18.02■□□□□ 0.48
GABRB1-202ENST00000381582 PARP14Q460N5 1801 aa18.02■□□□□ 0.47
GABRB1-202ENST00000381582 ZNF236Q9UL36 1845 aa18.02■□□□□ 0.47
GABRB1-202ENST00000381582 B4DLN1 442 aa18.01■□□□□ 0.47
GABRB1-202ENST00000381582 PEX10O60683 326 aa18.01■□□□□ 0.47
GABRB1-202ENST00000381582 GJB1P08034 283 aa18.01■□□□□ 0.47
GABRB1-202ENST00000381582 SMARCA1P28370 1054 aa18.01■□□□□ 0.47
GABRB1-202ENST00000381582 SLC4A3P48751 1232 aa18.01■□□□□ 0.47
GABRB1-202ENST00000381582 MRPL12P52815 198 aaKnown RBP18.01■□□□□ 0.47
GABRB1-202ENST00000381582 PPP2R5BQ15173 497 aa18.01■□□□□ 0.47
GABRB1-202ENST00000381582 SLC12A7Q9Y666 1083 aa18.01■□□□□ 0.47
GABRB1-202ENST00000381582 LOC102724159A0A0B4J2E5 919 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 KLRF2D3W0D1 207 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 ALAS1P13196 640 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 CCL5P13501 91 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 ELNP15502 786 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 SLC16A2P36021 539 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 RCAN1P53805 252 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 GRM4Q14833 912 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 PWP2Q15269 919 aaKnown RBP18■□□□□ 0.47
GABRB1-202ENST00000381582 CCDC174Q6PII3 467 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 ZNF467Q7Z7K2 595 aaPredicted RBP18■□□□□ 0.47
GABRB1-202ENST00000381582 TRERF1Q96PN7 1200 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 RNF146Q9NTX7 359 aa18■□□□□ 0.47
GABRB1-202ENST00000381582 SH2B2O14492 632 aaPredicted RBP17.99■□□□□ 0.47
GABRB1-202ENST00000381582 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
GABRB1-202ENST00000381582 SGMS1Q86VZ5 419 aa17.99■□□□□ 0.47
GABRB1-202ENST00000381582 MCF2L2Q86YR7 1114 aa17.99■□□□□ 0.47
GABRB1-202ENST00000381582 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
GABRB1-202ENST00000381582 SAMD3Q8N6K7 520 aa17.99■□□□□ 0.47
GABRB1-202ENST00000381582 TRIB2Q92519 343 aa17.99■□□□□ 0.47
GABRB1-202ENST00000381582 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
GABRB1-202ENST00000381582 ABCB11O95342 1321 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 ZSWIM8A7E2V4 1837 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 PALM3A6NDB9 673 aaPredicted RBP17.98■□□□□ 0.47
GABRB1-202ENST00000381582 RGS19P49795 217 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 ANTXR2P58335 489 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 TROAPQ12815 778 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 ADGRF4Q8IZF3 695 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 RGS22Q8NE09 1264 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 CHMP4CQ96CF2 233 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
GABRB1-202ENST00000381582 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
GABRB1-202ENST00000381582 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
GABRB1-202ENST00000381582 CNPY2Q9Y2B0 182 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 MRPL11Q9Y3B7 192 aaKnown RBP17.98■□□□□ 0.47
GABRB1-202ENST00000381582 ZNF536O15090 1300 aa17.98■□□□□ 0.47
GABRB1-202ENST00000381582 CCDC196A0A1B0GTZ2 297 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 ASB14A6NK59 587 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 POTEB2H3BUK9 544 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 GOLGA8HP0CJ92 632 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 PRKAR2AP13861 404 aaKnown RBP17.97■□□□□ 0.47
GABRB1-202ENST00000381582 GJA8P48165 433 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 ANAPC15P60006 121 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 CDC37Q16543 378 aaPredicted RBP17.97■□□□□ 0.47
GABRB1-202ENST00000381582 ZNF792Q3KQV3 632 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 MAP3K21Q5TCX8 1036 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 FBXO11Q86XK2 927 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 MAML3Q96JK9 1138 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 AGBL1Q96MI9 1066 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
GABRB1-202ENST00000381582 USP26Q9BXU7 913 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 TM6SF1Q9BZW5 370 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 UBA5Q9GZZ9 404 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.97■□□□□ 0.47
GABRB1-202ENST00000381582 HOMER2Q9NSB8 354 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 MAD2L2Q9UI95 211 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 RIPK3Q9Y572 518 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
GABRB1-202ENST00000381582 ZBTB5O15062 677 aa17.96■□□□□ 0.47
GABRB1-202ENST00000381582 SOX10P56693 466 aa17.96■□□□□ 0.47
GABRB1-202ENST00000381582 EXOSC10Q01780 885 aaKnown RBP17.96■□□□□ 0.47
GABRB1-202ENST00000381582 FBXL16Q8N461 479 aa17.96■□□□□ 0.47
GABRB1-202ENST00000381582 ANKLE1Q8NAG6 615 aa17.96■□□□□ 0.47
GABRB1-202ENST00000381582 PAK6Q9NQU5 681 aaPredicted RBP17.96■□□□□ 0.47
GABRB1-202ENST00000381582 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
GABRB1-202ENST00000381582 SNX14Q9Y5W7 946 aa17.96■□□□□ 0.47
GABRB1-202ENST00000381582 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
GABRB1-202ENST00000381582 COL11A1P12107 1806 aaPredicted RBP17.95■□□□□ 0.46
GABRB1-202ENST00000381582 DNAJC25-GNG10A0A024R161 153 aa17.95■□□□□ 0.46
GABRB1-202ENST00000381582 COBLO75128 1261 aa17.95■□□□□ 0.46
GABRB1-202ENST00000381582 SGPL1O95470 568 aa17.95■□□□□ 0.46
GABRB1-202ENST00000381582 MAMDC4Q6UXC1 1216 aa17.95■□□□□ 0.46
GABRB1-202ENST00000381582 RASEFQ8IZ41 740 aa17.95■□□□□ 0.46
GABRB1-202ENST00000381582 NPLOC4Q8TAT6 608 aa17.95■□□□□ 0.46
GABRB1-202ENST00000381582 RRP36Q96EU6 259 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms