RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 STAG1Q8WVM7 1258 aa20.4■□□□□ 0.86
HMGN1-204ENST00000380749 TSEN34Q9BSV6 310 aaKnown RBP20.4■□□□□ 0.86
HMGN1-204ENST00000380749 ABHD16BQ9H3Z7 469 aa20.4■□□□□ 0.86
HMGN1-204ENST00000380749 RNF146Q9NTX7 359 aa20.4■□□□□ 0.86
HMGN1-204ENST00000380749 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-204ENST00000380749 PLA2G6O60733 806 aa20.39■□□□□ 0.85
HMGN1-204ENST00000380749 TLE2Q04725 743 aa20.39■□□□□ 0.85
HMGN1-204ENST00000380749 TKFCQ3LXA3 575 aa20.39■□□□□ 0.85
HMGN1-204ENST00000380749 Q7L0L9 218 aa20.39■□□□□ 0.85
HMGN1-204ENST00000380749 NUP133Q8WUM0 1156 aa20.39■□□□□ 0.85
HMGN1-204ENST00000380749 SPC25Q9HBM1 224 aa20.39■□□□□ 0.85
HMGN1-204ENST00000380749 TOMM22Q9NS69 142 aa20.39■□□□□ 0.85
HMGN1-204ENST00000380749 MOXD2PA6NHM9 499 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 NMT2O60551 498 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 DUSP11O75319 330 aaKnown RBP20.38■□□□□ 0.85
HMGN1-204ENST00000380749 CLTBP09497 229 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 ACVR2BQ13705 512 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 ALX1Q15699 326 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 MCMDC2Q4G0Z9 681 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 KCTD1Q719H9 257 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 ARMCX2Q7L311 632 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 FGD4Q96M96 766 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 STARD7Q9NQZ5 370 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 TACC3Q9Y6A5 838 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
HMGN1-204ENST00000380749 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 POTEB2H3BUK9 544 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 PQBP1O60828 265 aaKnown RBP20.37■□□□□ 0.85
HMGN1-204ENST00000380749 ACLYP53396 1101 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 RCSD1Q6JBY9 416 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 BADQ92934 168 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 CHMP4CQ96CF2 233 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 FAM227BQ96M60 508 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 LNPKQ9C0E8 428 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 A1CFQ9NQ94 594 aaKnown RBP20.37■□□□□ 0.85
HMGN1-204ENST00000380749 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 EYSQ5T1H1 3165 aa20.37■□□□□ 0.85
HMGN1-204ENST00000380749 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 ALAS1P13196 640 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 CCDC144BQ3MJ40 725 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 CCDC174Q6PII3 467 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 DCAF4Q8WV16 495 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 AGBL1Q96MI9 1066 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 INCENPQ9NQS7 918 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 MTMR7Q9Y216 660 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 ZNF536O15090 1300 aa20.36■□□□□ 0.85
HMGN1-204ENST00000380749 TRIM43BA6NCK2 446 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 C6orf222P0C671 652 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-204ENST00000380749 CST5P28325 142 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-204ENST00000380749 SH3RF1Q7Z6J0 888 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 CCDC144CPQ8IYA2 1237 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 FAM133AQ8N9E0 248 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 PCSK9Q8NBP7 692 aaKnown RBP20.35■□□□□ 0.85
HMGN1-204ENST00000380749 KLHDC9Q8NEP7 349 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 TRIM43Q96BQ3 446 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-204ENST00000380749 GLT1D1Q96MS3 346 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 TRERF1Q96PN7 1200 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 MTMR10Q9NXD2 777 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 PRR12Q9ULL5 1215 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 STXBP5LQ9Y2K9 1186 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 CCDC171Q6TFL3 1326 aa20.35■□□□□ 0.85
HMGN1-204ENST00000380749 FGAP02671 866 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 FGRP09769 529 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 NOVP48745 357 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 CNTN2Q02246 1040 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 NMIQ13287 307 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 RRP12Q5JTH9 1297 aaKnown RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 RASGRP2Q7LDG7 609 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 SLC17A8Q8NDX2 589 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 RWDD1Q9H446 243 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 MROH7Q68CQ1 1323 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 ASB14A6NK59 587 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 DCDC2CA8MYV0 355 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 KIAA0355O15063 1070 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 HSPD1P10809 573 aaKnown RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 TOP1P11387 765 aaKnown RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 PCP11498 1178 aaKnown RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 RAG1P15918 1043 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 GJA9P57773 515 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 SHHQ15465 462 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 KCNA10Q16322 511 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 FAM109BQ6ICB4 259 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 ZNF589Q86UQ0 364 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 RILPL2Q969X0 211 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 TOX2Q96NM4 488 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 UPF3AQ9H1J1 476 aaKnown RBP20.34■□□□□ 0.85
HMGN1-204ENST00000380749 TMEM39AQ9NV64 488 aa20.34■□□□□ 0.85
HMGN1-204ENST00000380749 PRUNE2Q8WUY3 3088 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 ELP1O95163 1332 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 MYADML2A6NDP7 307 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 ADCY6O43306 1168 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 C9orf50Q5SZB4 431 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 ZNF697Q5TEC3 545 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 CCSAPQ6IQ19 270 aaPredicted RBP20.33■□□□□ 0.84
HMGN1-204ENST00000380749 ANKRD33Q7Z3H0 272 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 SMC5Q8IY18 1101 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms