RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC171-201ENST00000380701 RAB20Q9NX57 234 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 TRIM35Q9UPQ4 493 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 HEG1Q9ULI3 1381 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 HECW2Q9P2P5 1572 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 PTCH1Q13635 1447 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 PFKFB2O60825 505 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 SUGT1Q9Y2Z0 365 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 PCDHA1Q9Y5I3 950 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 TNKSO95271 1327 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 BMP3P12645 472 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 MMP14P50281 582 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 GEN1Q17RS7 908 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 FAM102BQ5T8I3 360 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 PPFIBP2Q8ND30 876 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 RIC8AQ9NPQ8 531 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 STAM2O75886 525 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 RNF8O76064 485 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 C8orf74Q6P047 294 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 CHST3Q7LGC8 479 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 NDUFAF2Q8N183 169 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 ANKRD36BP1Q96IX9 119 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 TPD52P55327 224 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PAK2Q13177 524 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PRPSAP1Q14558 356 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 ADALQ6DHV7 355 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PPP1R21Q6ZMI0 780 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PPP2R3CQ969Q6 453 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 CCDC68Q9H2F9 335 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 BSDC1Q9NW68 430 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 DDX25Q9UHL0 483 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 SPATA31A3Q5VYP0 1347 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 ADGBQ8N7X0 1667 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PDE6CP51160 858 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 NOLC1Q14978 699 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 RPS6KA1Q15418 735 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 SH2D4BQ5SQS7 431 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 CCDC121Q6ZUS5 278 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 GTF3C6Q969F1 213 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 CALR3Q96L12 384 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PAIP2Q9BPZ3 127 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 ZNF341Q9BYN7 854 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 HOXC10Q9NYD6 342 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 A2ML1A8K2U0 1454 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 LMNB1P20700 586 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 XPAP23025 273 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 CTDSPL2Q05D32 466 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 KRT24Q2M2I5 525 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 CFAP221Q4G0U5 840 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 TMEM179Q6ZVK1 233 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 TYW1Q9NV66 732 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PALLDQ8WX93 1383 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 KDM5AP29375 1690 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 I3L4J1 428 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 DDX39AO00148 427 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 POLR2DO15514 142 aaKnown RBP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 MED7O43513 233 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 RCAN1P53805 252 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 PRR16Q569H4 304 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 MAP3K21Q5TCX8 1036 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 SLFN12LQ6IEE8 588 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 ARMCX2Q7L311 632 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 HDXQ7Z353 690 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 IL17REQ8NFR9 667 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 DCAF4Q8WV16 495 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 COA7Q96BR5 231 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC171-201ENST00000380701 SYNMO15061 1565 aa7.88□□□□□ -1.15
CCDC171-201ENST00000380701 K7ENM7 598 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 PSAPP07602 524 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 MFAP3P55082 362 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 NEK9Q8TD19 979 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 ZKSCAN5Q9Y2L8 839 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 ZNF202O95125 648 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 RXRAP19793 462 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 ASPHQ12797 758 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 FAM26FQ5R3K3 315 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 MSL1Q68DK7 614 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 PPP1R18Q6NYC8 613 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 ARMCX5Q6P1M9 558 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 INTS8Q75QN2 995 aaKnown RBP7.87□□□□□ -1.15
CCDC171-201ENST00000380701 ACCSQ96QU6 501 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 PPP1R9BQ96SB3 815 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 NARFQ9UHQ1 456 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 AMFRQ9UKV5 643 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 PPARGP37231 505 aaPredicted RBP7.87□□□□□ -1.15
CCDC171-201ENST00000380701 KPNA2P52292 529 aaKnown RBP7.87□□□□□ -1.15
CCDC171-201ENST00000380701 JAK3P52333 1124 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 CPLX4Q7Z7G2 160 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 NELFBQ8WX92 580 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 ATRIPQ8WXE1 791 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 TIGD1Q96MW7 591 aa7.87□□□□□ -1.15
CCDC171-201ENST00000380701 SELENOSQ9BQE4 189 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms