RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 MKL1Q969V6 931 aa27.48■■□□□ 1.99
U2AF1-202ENST00000380276 ERC2O15083 957 aa27.47■■□□□ 1.99
U2AF1-202ENST00000380276 FOSL2P15408 326 aa27.47■■□□□ 1.99
U2AF1-202ENST00000380276 CCDC144BQ3MJ40 725 aa27.47■■□□□ 1.99
U2AF1-202ENST00000380276 ARMCX2Q7L311 632 aa27.47■■□□□ 1.99
U2AF1-202ENST00000380276 ANKRD33Q7Z3H0 272 aa27.47■■□□□ 1.99
U2AF1-202ENST00000380276 PCSK9Q8NBP7 692 aaKnown RBP27.47■■□□□ 1.99
U2AF1-202ENST00000380276 ABHD16BQ9H3Z7 469 aa27.47■■□□□ 1.99
U2AF1-202ENST00000380276 ASGR1P07306 291 aa27.46■■□□□ 1.99
U2AF1-202ENST00000380276 STAT2P52630 851 aa27.46■■□□□ 1.99
U2AF1-202ENST00000380276 OAZ1P54368 228 aa27.46■■□□□ 1.99
U2AF1-202ENST00000380276 NOL8Q76FK4 1167 aaKnown RBP27.46■■□□□ 1.99
U2AF1-202ENST00000380276 NEDD1Q8NHV4 660 aa27.46■■□□□ 1.99
U2AF1-202ENST00000380276 TOX2Q96NM4 488 aa27.46■■□□□ 1.99
U2AF1-202ENST00000380276 SYNPO2Q9UMS6 1093 aa27.46■■□□□ 1.99
U2AF1-202ENST00000380276 MROH7Q68CQ1 1323 aa27.45■■□□□ 1.99
U2AF1-202ENST00000380276 TTC41PQ6P2S7 1318 aa27.45■■□□□ 1.99
U2AF1-202ENST00000380276 PPARAQ07869 468 aa27.45■■□□□ 1.98
U2AF1-202ENST00000380276 GNASQ5JWF2 1037 aa27.45■■□□□ 1.98
U2AF1-202ENST00000380276 CCDC144CPQ8IYA2 1237 aa27.45■■□□□ 1.98
U2AF1-202ENST00000380276 ACAD9Q9H845 621 aa27.45■■□□□ 1.98
U2AF1-202ENST00000380276 MCM3APO60318 1980 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 ADCY6O43306 1168 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 SLC1A4P43007 532 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 CNTN2Q02246 1040 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 CCSAPQ6IQ19 270 aaPredicted RBP27.44■■□□□ 1.98
U2AF1-202ENST00000380276 FGD4Q96M96 766 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 RNF146Q9NTX7 359 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 MTMR7Q9Y216 660 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 PLIN4Q96Q06 1357 aa27.44■■□□□ 1.98
U2AF1-202ENST00000380276 ELP1O95163 1332 aa27.43■■□□□ 1.98
U2AF1-202ENST00000380276 TIMP1P01033 207 aa27.43■■□□□ 1.98
U2AF1-202ENST00000380276 FDX1P10109 184 aa27.43■■□□□ 1.98
U2AF1-202ENST00000380276 CST5P28325 142 aaPredicted RBP27.43■■□□□ 1.98
U2AF1-202ENST00000380276 FAM160B2Q86V87 743 aa27.43■■□□□ 1.98
U2AF1-202ENST00000380276 CHURC1Q8WUH1 139 aa27.43■■□□□ 1.98
U2AF1-202ENST00000380276 STX8Q9UNK0 236 aa27.43■■□□□ 1.98
U2AF1-202ENST00000380276 LAMA2P24043 3122 aaKnown RBP27.43■■□□□ 1.98
U2AF1-202ENST00000380276 A0A0U1RQG5 324 aaPredicted RBP27.42■■□□□ 1.98
U2AF1-202ENST00000380276 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.42■■□□□ 1.98
U2AF1-202ENST00000380276 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.42■■□□□ 1.98
U2AF1-202ENST00000380276 TSPY2A6NKD2 308 aa27.42■■□□□ 1.98
U2AF1-202ENST00000380276 TLR3O15455 904 aaKnown RBP27.42■■□□□ 1.98
U2AF1-202ENST00000380276 MCCP23508 829 aa27.42■■□□□ 1.98
U2AF1-202ENST00000380276 GJA9P57773 515 aa27.42■■□□□ 1.98
U2AF1-202ENST00000380276 CCDC174Q6PII3 467 aa27.42■■□□□ 1.98
U2AF1-202ENST00000380276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.42■■□□□ 1.98
U2AF1-202ENST00000380276 OTUD7AQ8TE49 926 aaPredicted RBP27.42■■□□□ 1.98
U2AF1-202ENST00000380276 AGBL1Q96MI9 1066 aa27.42■■□□□ 1.98
U2AF1-202ENST00000380276 PPP1R12CQ9BZL4 782 aa27.42■■□□□ 1.98
U2AF1-202ENST00000380276 ALAS1P13196 640 aa27.41■■□□□ 1.98
U2AF1-202ENST00000380276 DNAJB2P25686 324 aa27.41■■□□□ 1.98
U2AF1-202ENST00000380276 BEX3Q00994 111 aa27.41■■□□□ 1.98
U2AF1-202ENST00000380276 PI4K2BQ8TCG2 481 aa27.41■■□□□ 1.98
U2AF1-202ENST00000380276 STAG1Q8WVM7 1258 aa27.41■■□□□ 1.98
U2AF1-202ENST00000380276 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.41■■□□□ 1.98
U2AF1-202ENST00000380276 UPF3AQ9H1J1 476 aaKnown RBP27.41■■□□□ 1.98
U2AF1-202ENST00000380276 TBX21Q9UL17 535 aa27.41■■□□□ 1.98
U2AF1-202ENST00000380276 TMEM265A0A087WTH1 108 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 ARVCFO00192 962 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 SNAP25P60880 206 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 TNFAIP2Q03169 654 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 PPIGQ13427 754 aaKnown RBP eCLIP27.4■■□□□ 1.98
U2AF1-202ENST00000380276 ZMYM1Q5SVZ6 1142 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 MFSD5Q6N075 450 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 CCDC129Q6ZRS4 1044 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 KCTD1Q719H9 257 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 GMCL1Q96IK5 515 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 TRERF1Q96PN7 1200 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 A1CFQ9NQ94 594 aaKnown RBP27.4■■□□□ 1.98
U2AF1-202ENST00000380276 ZBTB47Q9UFB7 747 aaPredicted RBP27.4■■□□□ 1.98
U2AF1-202ENST00000380276 A0A0C4DFX4 3053 aa27.4■■□□□ 1.98
U2AF1-202ENST00000380276 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.39■■□□□ 1.98
U2AF1-202ENST00000380276 CTDSPL2Q05D32 466 aa27.39■■□□□ 1.98
U2AF1-202ENST00000380276 PPP4R3BQ5MIZ7 849 aa27.39■■□□□ 1.98
U2AF1-202ENST00000380276 UNC80Q8N2C7 3258 aa27.38■■□□□ 1.97
U2AF1-202ENST00000380276 CDK7P50613 346 aa27.38■■□□□ 1.97
U2AF1-202ENST00000380276 TMEM199Q8N511 208 aa27.38■■□□□ 1.97
U2AF1-202ENST00000380276 SOWAHBA6NEL2 793 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 ASB14A6NK59 587 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 MX1P20591 662 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 CCDC96Q2M329 555 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 TKFCQ3LXA3 575 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 FAM133AQ8N9E0 248 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 KATNBL1Q9H079 304 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 AP5M1Q9H0R1 490 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 INCENPQ9NQS7 918 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 PCDHB15Q9Y5E8 787 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 ZNF536O15090 1300 aa27.37■■□□□ 1.97
U2AF1-202ENST00000380276 RANBP6O60518 1105 aaKnown RBP27.36■■□□□ 1.97
U2AF1-202ENST00000380276 NMT2O60551 498 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 ACRP10323 421 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 CSF2RAP15509 400 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 GRIN2CQ14957 1233 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 EEPD1Q7L9B9 569 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 RASGRP2Q7LDG7 609 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 TLK2Q86UE8 772 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 FAM126BQ8IXS8 530 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 TIFAQ96CG3 184 aa27.36■■□□□ 1.97
U2AF1-202ENST00000380276 TOMM22Q9NS69 142 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms