RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 RANBP17Q9H2T7 1088 aaKnown RBP7.21□□□□□ -1.26
FOCAD-202ENST00000380249 FZD1Q9UP38 647 aa7.21□□□□□ -1.26
FOCAD-202ENST00000380249 LAMB1P07942 1786 aa7.21□□□□□ -1.26
FOCAD-202ENST00000380249 CDK5RAP2Q96SN8 1893 aa7.21□□□□□ -1.26
FOCAD-202ENST00000380249 NCLP19338 710 aaKnown RBP7.21□□□□□ -1.26
FOCAD-202ENST00000380249 FBXO11Q86XK2 927 aa7.21□□□□□ -1.26
FOCAD-202ENST00000380249 BICD2Q8TD16 824 aa7.21□□□□□ -1.26
FOCAD-202ENST00000380249 GPHNQ9NQX3 736 aaPredicted RBP7.21□□□□□ -1.26
FOCAD-202ENST00000380249 ZNF214Q9UL59 606 aaPredicted RBP7.21□□□□□ -1.26
FOCAD-202ENST00000380249 BRPF3Q9ULD4 1205 aa7.21□□□□□ -1.26
FOCAD-202ENST00000380249 SIPA1L1O43166 1804 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 C17orf99Q6UX52 265 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 GREB1LQ9C091 1923 aaPredicted RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 FUT2Q10981 343 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 KCTD2Q14681 263 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 NTRK3Q16288 839 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 XRRA1Q6P2D8 792 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 TMX3Q96JJ7 454 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 ACAD9Q9H845 621 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 GPCPD1Q9NPB8 672 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 ORC3Q9UBD5 711 aaPredicted RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 TPCN1Q9ULQ1 816 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 HPS5Q9UPZ3 1129 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 DOCK1Q14185 1865 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 SSRP1Q08945 709 aaKnown RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 SAFBQ15424 915 aaKnown RBP eCLIP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 QRICH1Q2TAL8 776 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 PTPN18Q99952 460 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 SPATC1LQ9H0A9 340 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 JMJD4Q9H9V9 463 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 CWC22Q9HCG8 908 aaKnown RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 DIS3Q9Y2L1 958 aaKnown RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 PCDHA1Q9Y5I3 950 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 PTMAP06454 111 aaKnown RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 SCG2P13521 617 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 CAPN2P17655 700 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 ADD1P35611 737 aaKnown RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 CDC37Q16543 378 aaPredicted RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 FAM217BQ9NTX9 383 aaPredicted RBP7.2□□□□□ -1.26
FOCAD-202ENST00000380249 MAD2L2Q9UI95 211 aa7.2□□□□□ -1.26
FOCAD-202ENST00000380249 TRIM29Q14134 588 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 SMARCC2Q8TAQ2 1214 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 EHMT1Q9H9B1 1298 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 BRMS1Q9HCU9 246 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 RBPJLQ9UBG7 517 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 ADD3Q9UEY8 706 aaKnown RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 SLC15A5A6NIM6 579 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 GPR25O00155 361 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 HOXC6P09630 235 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 GRM1Q13255 1194 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 TRMT44Q8IYL2 757 aaKnown RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 MSL3Q8N5Y2 521 aaKnown RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 C6orf50Q9HD87 102 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 SMC3Q9UQE7 1217 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 PFASO15067 1338 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 ERVK-9P63128 1117 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 ERVK-24P63145 666 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 SP3Q02447 781 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 ME3Q16798 604 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 PFKFB3Q16875 520 aaPredicted RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 FAM184AQ8NB25 1140 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 REPS2Q8NFH8 660 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 SOCS4Q8WXH5 440 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 COA7Q96BR5 231 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 FBXO28Q9NVF7 368 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 ADGRA2Q96PE1 1338 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 FMNL1O95466 1100 aaPredicted RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 SHROOM1Q2M3G4 852 aaPredicted RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 CUL5Q93034 780 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 KIFC2Q96AC6 838 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 NRBP1Q9UHY1 535 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 V9GY48 417 aaPredicted RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 TRPA1O75762 1119 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 AP3B2Q13367 1082 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 KCTD1Q719H9 257 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 DNAJC5GQ8N7S2 189 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 NAP1L4Q99733 375 aaKnown RBP7.19□□□□□ -1.26
FOCAD-202ENST00000380249 UBA5Q9GZZ9 404 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 RNF146Q9NTX7 359 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 CCPG1Q9ULG6 757 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 CNTNAP5Q8WYK1 1306 aa7.19□□□□□ -1.26
FOCAD-202ENST00000380249 FKTNO75072 461 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 TREML2Q5T2D2 321 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 XRCC5P13010 732 aaKnown RBP7.18□□□□□ -1.26
FOCAD-202ENST00000380249 SNRNP48Q6IEG0 339 aaKnown RBP7.18□□□□□ -1.26
FOCAD-202ENST00000380249 ADGRF4Q8IZF3 695 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 NSUN7Q8NE18 718 aaKnown RBP7.18□□□□□ -1.26
FOCAD-202ENST00000380249 SENP2Q9HC62 589 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 FCGRTP55899 365 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 SRBD1Q8N5C6 995 aaKnown RBP7.18□□□□□ -1.26
FOCAD-202ENST00000380249 NUP88Q99567 741 aaPredicted RBP7.18□□□□□ -1.26
FOCAD-202ENST00000380249 MYL10Q9BUA6 226 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 MOV10L1Q9BXT6 1211 aaKnown RBP7.18□□□□□ -1.26
FOCAD-202ENST00000380249 PTPDC1A2A3K4 754 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 CTCFP49711 727 aaPredicted RBP7.18□□□□□ -1.26
FOCAD-202ENST00000380249 CRHR2Q13324 411 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 RNF186Q9NXI6 227 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 MTMR7Q9Y216 660 aa7.18□□□□□ -1.26
FOCAD-202ENST00000380249 PIK3CDO00329 1044 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms