RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 KLRC3Q07444 240 aa22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 TNIP1Q15025 636 aa22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 NONOQ15233 471 aaKnown RBP eCLIP22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 NBPF9Q3BBW0 867 aa22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 REXO1Q8N1G1 1221 aaKnown RBP22.59■■□□□ 1.21
PDLIM5-205ENST00000380180 PSDA5PKW4 1024 aaPredicted RBP22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 ZBTB5O15062 677 aa22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 POSTNQ15063 836 aa22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 JAKMIP3Q5VZ66 844 aa22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 KANK3Q6NY19 840 aa22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 DHX58Q96C10 678 aa22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 TMEM39BQ9GZU3 492 aa22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 MYOZ2Q9NPC6 264 aa22.58■■□□□ 1.21
PDLIM5-205ENST00000380180 PTGER2P43116 358 aa22.58■■□□□ 1.2
PDLIM5-205ENST00000380180 FAM83AQ86UY5 434 aa22.58■■□□□ 1.2
PDLIM5-205ENST00000380180 ZSCAN30Q86W11 494 aa22.58■■□□□ 1.2
PDLIM5-205ENST00000380180 CDAN1Q8IWY9 1227 aa22.58■■□□□ 1.2
PDLIM5-205ENST00000380180 AOPEPQ8N6M6 819 aa22.58■■□□□ 1.2
PDLIM5-205ENST00000380180 GMCL1P1Q8NEA9 526 aa22.58■■□□□ 1.2
PDLIM5-205ENST00000380180 TMEM260Q9NX78 707 aa22.58■■□□□ 1.2
PDLIM5-205ENST00000380180 ADCY7P51828 1080 aa22.57■■□□□ 1.2
PDLIM5-205ENST00000380180 BPIFA3Q9BQP9 254 aa22.57■■□□□ 1.2
PDLIM5-205ENST00000380180 TMEM60Q9H2L4 133 aa22.57■■□□□ 1.2
PDLIM5-205ENST00000380180 PRR29P0C7W0 189 aa22.57■■□□□ 1.2
PDLIM5-205ENST00000380180 GRAMD1CQ8IYS0 662 aa22.57■■□□□ 1.2
PDLIM5-205ENST00000380180 MYH7BA7E2Y1 1941 aa22.56■■□□□ 1.2
PDLIM5-205ENST00000380180 A0A1W2PRG0 241 aa22.56■■□□□ 1.2
PDLIM5-205ENST00000380180 LETM2Q2VYF4 491 aa22.56■■□□□ 1.2
PDLIM5-205ENST00000380180 PPP1R18Q6NYC8 613 aa22.56■■□□□ 1.2
PDLIM5-205ENST00000380180 TBCKQ8TEA7 893 aa22.56■■□□□ 1.2
PDLIM5-205ENST00000380180 TRIM5Q9C035 493 aa22.56■■□□□ 1.2
PDLIM5-205ENST00000380180 CCNT1O60563 726 aaKnown RBP22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 NDUFB10O96000 172 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 SLFN14P0C7P3 912 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 LONP1P36776 959 aaKnown RBP22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 NEK8Q86SG6 692 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 GMCL1Q96IK5 515 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 NUP88Q99567 741 aaPredicted RBP22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 RIC8AQ9NPQ8 531 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 RASSF7Q02833 373 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 NT5DC1Q5TFE4 455 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 DTHD1Q6ZMT9 781 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 MIGA2Q7L4E1 593 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 PLA2G4DQ86XP0 818 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 PGAP2Q9UHJ9 254 aa22.55■■□□□ 1.2
PDLIM5-205ENST00000380180 LTBP3Q9NS15 1303 aa22.54■■□□□ 1.2
PDLIM5-205ENST00000380180 LAD1O00515 517 aa22.54■■□□□ 1.2
PDLIM5-205ENST00000380180 TBC1D12O60347 775 aa22.54■■□□□ 1.2
PDLIM5-205ENST00000380180 SARSP49591 514 aaKnown RBP22.54■■□□□ 1.2
PDLIM5-205ENST00000380180 QRICH1Q2TAL8 776 aa22.54■■□□□ 1.2
PDLIM5-205ENST00000380180 ILDR2Q71H61 639 aa22.54■■□□□ 1.2
PDLIM5-205ENST00000380180 UPF1Q92900 1129 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDLIM5-205ENST00000380180 ZNF75DP51815 510 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 PRELPP51888 382 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 SMARCE1Q969G3 411 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 BMP6P22004 513 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 RPS12P25398 132 aaKnown RBP22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 CDC25AP30304 524 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 PRPHP41219 470 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 AFMP43652 599 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 ZNF280AP59817 542 aaPredicted RBP22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 SARM1Q6SZW1 724 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 SH3RF1Q7Z6J0 888 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 PAGE5Q96GU1 130 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 CCDC34Q96HJ3 373 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 MAN1B1Q9UKM7 699 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 SMCHD1A6NHR9 2005 aa22.53■■□□□ 1.2
PDLIM5-205ENST00000380180 EGFRP00533 1210 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 BMP3P12645 472 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 ECE1P42892 770 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 MMP14P50281 582 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 E2F4Q16254 413 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 CDC37Q16543 378 aaPredicted RBP22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 SPC24Q8NBT2 197 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 CUL5Q93034 780 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 ARHGEF10LQ9HCE6 1279 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 ZBTB21Q9ULJ3 1066 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 SYNPO2Q9UMS6 1093 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 SCAF8Q9UPN6 1271 aaKnown RBP22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 ATAD5Q96QE3 1844 aa22.52■■□□□ 1.2
PDLIM5-205ENST00000380180 MRPL12P52815 198 aaKnown RBP22.52■■□□□ 1.19
PDLIM5-205ENST00000380180 IQUBQ8NA54 791 aa22.52■■□□□ 1.19
PDLIM5-205ENST00000380180 SPATA20Q8TB22 786 aa22.52■■□□□ 1.19
PDLIM5-205ENST00000380180 PSTPIP2Q9H939 334 aa22.52■■□□□ 1.19
PDLIM5-205ENST00000380180 ZKSCAN5Q9Y2L8 839 aa22.52■■□□□ 1.19
PDLIM5-205ENST00000380180 PCDHA1Q9Y5I3 950 aa22.52■■□□□ 1.19
PDLIM5-205ENST00000380180 TMEM232C9JQI7 657 aa22.51■■□□□ 1.19
PDLIM5-205ENST00000380180 MSNP26038 577 aaKnown RBP22.51■■□□□ 1.19
PDLIM5-205ENST00000380180 CLK2P49760 499 aaKnown RBP22.51■■□□□ 1.19
PDLIM5-205ENST00000380180 UBE2SQ16763 222 aa22.51■■□□□ 1.19
PDLIM5-205ENST00000380180 SPICE1Q8N0Z3 855 aa22.51■■□□□ 1.19
PDLIM5-205ENST00000380180 ACER1Q8TDN7 264 aa22.51■■□□□ 1.19
PDLIM5-205ENST00000380180 SMTNL1A8MU46 457 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 FZD9O00144 591 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 NEMFO60524 1076 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 OR52Z1P0C646 297 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 TNNI2P48788 182 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 NCAPHQ15003 741 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms